RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
COPS3-214ENST00000577246 GPR78Q96P69 363 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 BBS4Q96RK4 519 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 DPH5Q9H2P9 285 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 C3orf14Q9HBI5 128 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 FARSBQ9NSD9 589 aaKnown RBP11.93□□□□□ -0.5
COPS3-214ENST00000577246 XPR1Q9UBH6 696 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 RNF14Q9UBS8 474 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
COPS3-214ENST00000577246 A0A087WV62 115 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 PCDH7O60245 1069 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 IL33O95760 270 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 KRT6AP02538 564 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 KRT6BP04259 564 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 THBS1P07996 1170 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 IL3P08700 152 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 ADH6P28332 368 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 AGTR1P30556 359 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 KRT6CP48668 564 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 CSTF3Q12996 717 aaKnown RBP11.92□□□□□ -0.5
COPS3-214ENST00000577246 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 TMEM201Q5SNT2 666 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 FIGNL1Q6PIW4 674 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 CLEC2AQ6UVW9 174 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 MARCH3Q86UD3 253 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 CCDC25Q86WR0 208 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 OR2V1Q8NHB1 315 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
COPS3-214ENST00000577246 ZBTB8AQ96BR9 441 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 ADAD1Q96M93 576 aaKnown RBP11.92□□□□□ -0.5
COPS3-214ENST00000577246 NSUN5Q96P11 429 aaKnown RBP11.92□□□□□ -0.5
COPS3-214ENST00000577246 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 POTEKPQ9BYX7 375 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 VPS11Q9H270 941 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 TIGARQ9NQ88 270 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 VDAC3Q9Y277 283 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 USF3Q68DE3 2245 aa11.92□□□□□ -0.5
COPS3-214ENST00000577246 CUBNO60494 3623 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 ADAMDEC1O15204 470 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 CXCL13O43927 109 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 NME6O75414 186 aaPredicted RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 KCNH1O95259 989 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 MAGEA4P43358 317 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 ZNF41P51814 821 aaPredicted RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 NUDT6P53370 316 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 RAC1P63000 192 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 PRR5P85299 388 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 P2RY6Q15077 328 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 SFRP5Q5T4F7 317 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 LETMD1Q6P1Q0 360 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 GALNT10Q86SR1 603 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 GTPBP8Q8N3Z3 284 aaPredicted RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 ROBO4Q8WZ75 1007 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 KISS1RQ969F8 398 aaPredicted RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
COPS3-214ENST00000577246 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 DDX18Q9NVP1 670 aaKnown RBP11.91□□□□□ -0.5
COPS3-214ENST00000577246 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 C7orf72A4D263 438 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 TNFSF11O14788 317 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 SSX4O60224 188 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 UTS2O95399 124 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 RPS17P08708 135 aaKnown RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 RFX3P48380 749 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 CASP9P55211 416 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 VLDLRP98155 873 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 BSPH1Q075Z2 132 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 ACSM2AQ08AH3 577 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 TAB1Q15750 504 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 UAP1Q16222 522 aaPredicted RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 PGGHGQ32M88 737 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 AGAP6Q5VW22 663 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 ACSM2BQ68CK6 577 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 DTX2Q86UW9 622 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 GABRG1Q8N1C3 465 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 PIWIL2Q8TC59 973 aaKnown RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 TNFRSF13CQ96RJ3 184 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 RTN4RQ9BZR6 473 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 TRIM2Q9C040 744 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 SHARPINQ9H0F6 387 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 L2HGDHQ9H9P8 463 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 GP6Q9HCN6 339 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 FBXO34Q9NWN3 711 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 CISD1Q9NZ45 108 aaKnown RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 GRID1Q9ULK0 1009 aa11.9□□□□□ -0.5
COPS3-214ENST00000577246 C19orf53Q9UNZ5 99 aaPredicted RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 UTP11Q9Y3A2 253 aaKnown RBP11.9□□□□□ -0.5
COPS3-214ENST00000577246 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms