RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 TEAD3Q99594 435 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 CBWD1Q9BRT8 395 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 CACNG6Q9BXT2 260 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 ADGRE3Q9BY15 652 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 EPHX3Q9H6B9 360 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 REEP1Q9H902 201 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 TRPV4Q9HBA0 871 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 PRMT7Q9NVM4 692 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 CLN6Q9NWW5 311 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 MGAT4CQ9UBM8 478 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 GIMAP2Q9UG22 337 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 FBXO7Q9Y3I1 522 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 KCTD3Q9Y597 815 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 MTCH2Q9Y6C9 303 aa7.5□□□□□ -1.21
TOM1L1-220ENST00000575333 BRCA1P38398 1863 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3BA6NDS4 549 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 H7C417 338 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF593O00488 134 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TP53I11O14683 189 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 AZIN1O14977 448 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 PIP5K1BO14986 540 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CACNG3O60359 315 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 SH3BGRLO75368 114 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ADAP00813 363 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 HKR1P10072 659 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 RHOQP17081 205 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ADCYAP1P18509 176 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 MPGP29372 298 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 MIPP30301 263 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 AGTR1P30556 359 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 RFX3P48380 749 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CDC42P60953 191 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 LSM6P62312 80 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CRY2Q49AN0 593 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 IDNKQ5T6J7 187 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ATG9BQ674R7 924 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3GQ6DHY5 549 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 KIAA1161Q6NSJ0 714 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ZNF549Q6P9A3 640 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 C15orf39Q6ZRI6 1047 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 OR6V1Q8N148 313 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CLEC4DQ8WXI8 215 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 PNPLA2Q96AD5 504 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 C14orf79Q96F83 325 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TSPAN17Q96FV3 270 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CMTM7Q96FZ5 175 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TCTN2Q96GX1 697 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ATXN7L3BQ96GX2 97 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TAAR1Q96RJ0 339 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ADAM2Q99965 735 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ACBD6Q9BR61 282 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 WRAP53Q9BUR4 548 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 MRI1Q9BV20 369 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 NFKBIZQ9BYH8 718 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 IKZF4Q9H2S9 585 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 KRCC1Q9NPI7 259 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 ACSS1Q9NUB1 689 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 FAM120CQ9NX05 1096 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CXXC1Q9P0U4 656 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 PIPOXQ9P0Z9 390 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 CFAP97Q9P2B7 532 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 COMMD3Q9UBI1 195 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 HACL1Q9UJ83 578 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 FBXL4Q9UKA2 621 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 GABRQQ9UN88 632 aa7.49□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3DA0A087WVF3 549 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3EA0A087X179 549 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 CCDC187A0A096LP49 1063 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 NAP1L6A6NFF2 107 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3LB9A6J9 549 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 RPL36A-HNRNPH2H7BZ11 118 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 ACKR2O00590 384 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 PPBPP02775 128 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 ITGA5P08648 1049 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 CPEP16870 476 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 RAB5AP20339 215 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 OR1E1P30953 314 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 THBS2P35442 1172 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 STAT5AP42229 794 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 ZFP36L2P47974 494 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 CDH11P55287 796 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 OR2B8PP59922 312 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 PPIAP62937 165 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 EIF4EBP2Q13542 120 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 GAMTQ14353 236 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 SURF2Q15527 256 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 PLK5Q496M5 336 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TRIM61Q5EBN2 209 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 DACT2Q5SW24 774 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TBC1D3CQ6IPX1 549 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 EIF5AL1Q6IS14 154 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 SLC39A4Q6P5W5 647 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 FBXO46Q6PJ61 603 aaPredicted RBP7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 TMEM270Q6UE05 265 aa7.48□□□□□ -1.21
TOM1L1-220ENST00000575333 QSOX2Q6ZRP7 698 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms