RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SEMG1P04279 462 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SERPIND1P05546 499 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ACP2P11117 423 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 PTBP1P26599 531 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 S100A11P31949 105 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TAS2R50P59544 299 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 HIST2H2AA3Q6FI13 130 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ASTLQ6HA08 431 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CHST9Q7L1S5 443 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 LAS2Q8IYD9 372 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TCEAL8Q8IYN2 117 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 FBXO15Q8NCQ5 510 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 GPR26Q8NDV2 337 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SCARB1Q8WTV0 552 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 NKX6-2Q9C056 277 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ZBP1Q9H171 429 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 OR51B5Q9H339 312 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 OR51I1Q9H343 314 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 IL17CQ9P0M4 197 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 BTNL2Q9UIR0 455 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 RCE1Q9Y256 329 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 INSL5Q9Y5Q6 135 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 KCNMB2Q9Y691 235 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 FAM74A7A6NL05 159 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CPSF4LA6NMK7 179 aaKnown RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 D6RAR5 112 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 STK25O00506 426 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 DPM1O60762 260 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 HMGN1P05114 100 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 MTAPQ13126 283 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SEC23BQ15437 767 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 METTL11BQ5VVY1 283 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 C18orf63Q68DL7 685 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ZCCHC12Q6PEW1 402 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 GSG1LQ6UXU4 331 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ZER1Q7Z7L7 766 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 HDDC3Q8N4P3 179 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM185AQ8NFB2 350 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ATOH1Q92858 354 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TCEAL3Q969E4 200 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 MCOLN1Q9GZU1 580 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SHARPINQ9H0F6 387 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 REEP4Q9H6H4 257 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 EGLN3Q9H6Z9 239 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 RDH14Q9HBH5 336 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 PRKAG2Q9UGJ0 569 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CCL26Q9Y258 94 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 HCFC2Q9Y5Z7 792 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 C7orf66A4D0T2 115 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF593O00488 134 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 KPNA3O00505 521 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TGM5O43548 720 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SERPINA3P01011 423 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CBR1P16152 277 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ELAVL4P26378 380 aaKnown RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 NSG1P42857 185 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 AKR1C2P52895 323 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SMCO1Q147U7 214 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 FAM27D1Q5T7N8 215 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 HBMQ6B0K9 141 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SLC30A6Q6NXT4 461 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ATRAIDQ6UW56 229 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 RAB11FIP2Q7L804 512 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 C12orf45Q8N5I9 185 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ZNF784Q8NCA9 323 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 OR10K1Q8NGX5 313 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 TCEAL4Q96EI5 215 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 ABHD1Q96SE0 405 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 DNTTIP1Q9H147 329 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 C20orf85Q9H1P6 137 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 OR51V1Q9H2C8 321 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 NIT2Q9NQR4 276 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 AKAP7Q9P0M2 348 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CFAP97Q9P2B7 532 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CDV3Q9UKY7 258 aaKnown RBP8.99□□□□□ -0.97
CCDC40-212ENST00000574799 CFAP54Q96N23 3096 aa8.99□□□□□ -0.97
CCDC40-212ENST00000574799 SLC9B1P1A6NJY1 282 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 FAM170BA6NMN3 283 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CASC3O15234 703 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 HOXA2O43364 376 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 HPXP02790 462 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SNRPBP14678 240 aaKnown RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CD79BP40259 229 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 MEOX2P50222 304 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 OR10A3P58181 314 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 AP3S2P59780 193 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TNFRSF17Q02223 184 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 ATXN7L3Q14CW9 347 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TSC22D1Q15714 1073 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 OR5M10Q6IEU7 315 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 WDR53Q7Z5U6 358 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-212ENST00000574799 SLC7A13Q8TCU3 470 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 TMEM19Q96HH6 336 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 CRB3Q9BUF7 120 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
CCDC40-212ENST00000574799 POLDIP3Q9BY77 421 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms