RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 EEF1E1O43324 174 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 GMFGO60234 142 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 RCBTB2O95199 551 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 IL18BPO95998 194 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 RPL3P39023 403 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 PRR5P85299 388 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 CHI3L2Q15782 390 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 CPTPQ5TA50 214 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 UBQLNLQ8IYU4 475 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 KRTCAP2Q8N6L1 136 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 WNT2BQ93097 391 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 INTS12Q96CB8 462 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 UCN2Q96RP3 112 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 ZCCHC3Q9NUD5 404 aaKnown RBP23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 FBXO34Q9NWN3 711 aa23.56■■□□□ 1.36
NPLOC4-215ENST00000574095 NUP214P35658 2090 aaPredicted RBP23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 KCNK2O95069 426 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 ALOX5P09917 674 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 PEPDP12955 493 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 C17orf67Q0P5P2 114 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 GANABQ14697 944 aaKnown RBP23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 BCL2A1Q16548 175 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 CEP85LQ5SZL2 805 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 ZAR1Q86SH2 424 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 OR4C3Q8NH37 302 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 FAM110BQ8TC76 370 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 C1GALT1C1Q96EU7 318 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 PPP1R36Q96LQ0 422 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 ZIM3Q96PE6 472 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 CRIM1Q9NZV1 1036 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 ZNF337Q9Y3M9 751 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 SNX8Q9Y5X2 465 aa23.55■■□□□ 1.36
NPLOC4-215ENST00000574095 TGM6O95932 706 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 POU3F2P20265 443 aaPredicted RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 PRIM2P49643 509 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 PDCD2Q16342 344 aaPredicted RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 ZCCHC12Q6PEW1 402 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 GRAMD2AQ8IUY3 354 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 GCNT2Q8N0V5 402 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 ZNF781Q8N8C0 355 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 JADE3Q92613 823 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 SSU72Q9NP77 194 aaKnown RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 JKAMPQ9P055 326 aa23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 FOXD3Q9UJU5 478 aaPredicted RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 EIF3LQ9Y262 564 aaKnown RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 ANKRD17O75179 2603 aaKnown RBP23.54■■□□□ 1.36
NPLOC4-215ENST00000574095 OR2M5A3KFT3 312 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 BIRC5O15392 142 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 OXSR1O95747 527 aaPredicted RBP23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 SERPINE1P05121 402 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 HMGN2P05204 90 aaKnown RBP23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 PEX19P40855 299 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 DIO3P55073 304 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 CLDN15P56746 228 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 ABCE1P61221 599 aaKnown RBP23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 LASP1Q14847 261 aaKnown RBP23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 EXOSC6Q5RKV6 272 aaKnown RBP23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 CCNJQ5T5M9 372 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 COX18Q8N8Q8 333 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 GATSQ8NAP1 163 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 OR5P2Q8WZ92 322 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 COQ8BQ96D53 544 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 CHMP6Q96FZ7 201 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 ZFP3Q96NJ6 502 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 C20orf27Q9GZN8 174 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 CXorf36Q9H7Y0 433 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 KCNK9Q9NPC2 374 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 ATAD3AQ9NVI7 634 aa23.53■■□□□ 1.36
NPLOC4-215ENST00000574095 IGLV3-32A0A0A0MS00 114 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 ESPNB1AK53 854 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 SHISA8B8ZZ34 492 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 H0YC42 278 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 H3BML4 177 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 HCRTR2O43614 444 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 C6orf47O95873 294 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 DHRS4L1P0CG22 281 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 G6PDP11413 515 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 PRPS1L1P21108 318 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 TBXA2RP21731 343 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 CCT3P49368 545 aaKnown RBP23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 SUCLG1P53597 346 aaKnown RBP23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 TPD52P55327 224 aaPredicted RBP23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 MPP2Q14168 576 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 FLYWCH1Q4VC44 716 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 CHMP1BQ7LBR1 199 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 P4HA3Q7Z4N8 544 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 RIMKLAQ8IXN7 391 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 MEIOBQ8N635 442 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 NRGNQ92686 78 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 PRPF18Q99633 342 aaKnown RBP23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 SFXN3Q9BWM7 321 aa23.52■■□□□ 1.36
NPLOC4-215ENST00000574095 MPDZO75970 2070 aa23.52■■□□□ 1.35
NPLOC4-215ENST00000574095 ALG1L2C9J202 215 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 TM9SF1O15321 606 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 SEC14L5O43304 696 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 NDUFB5O43674 189 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 CTAG2O75638 210 aa23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 POU6F2P78424 691 aaPredicted RBP23.51■■□□□ 1.35
NPLOC4-215ENST00000574095 EMX2Q04743 252 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms