RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 UGT1A4P22310 534 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TEAD1P28347 426 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PRDX3P30048 256 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 GTF2H1P32780 548 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 UGT1A3P35503 534 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 CBSP35520 551 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 AQP2P41181 271 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 NOVA1P51513 510 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 HNRNPMP52272 730 aaKnown RBP eCLIP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 NUP107P57740 925 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 RAB4BP61018 213 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 FAM27E3Q08E93 113 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PNRC1Q12796 327 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SMARCB1Q12824 385 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TRAF2Q12933 501 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PKP1Q13835 747 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 GRB7Q14451 532 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 NDUFAF6Q330K2 333 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 LINC00114Q6XXX2 140 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TMPRSS11AQ6ZMR5 421 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 DPY19L2P2Q6ZN68 376 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 KCNMB4Q86W47 210 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ERI1Q8IV48 349 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 UEVLDQ8IX04 471 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 GPALPP1Q8IXQ4 340 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ZBED8Q8IZ13 594 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SPEM1Q8N4L4 309 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 LRRC75AQ8NAA5 344 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 FAM98AQ8NCA5 519 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 OR14A16Q8NHC5 309 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 NANPQ8TBE9 248 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 MRAPQ8TCY5 172 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TAAR8Q969N4 342 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PSMG2Q969U7 264 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TSACCQ96A04 125 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TMEM19Q96HH6 336 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 GRAMD2BQ96HH9 432 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 BOD1Q96IK1 185 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 KIRREL1Q96J84 757 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 C12orf42Q96LP6 360 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SERPINB11Q96P15 392 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 CIB1Q99828 191 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 AGPAT1Q99943 283 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 MCRIP2Q9BUT9 160 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ALG8Q9BVK2 526 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 MAP1LC3CQ9BXW4 147 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PANK2Q9BZ23 570 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 PIGUQ9H490 435 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TUBB1Q9H4B7 451 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 C5orf66Q9H5L9 145 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SP140LQ9H930 580 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 RAVER2Q9HCJ3 691 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 VCX3AQ9NNX9 186 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ZC4H2Q9NQZ6 224 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 RNF146Q9NTX7 359 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC12A6Q9UHW9 1150 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 KIF25Q9UIL4 384 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 FAF1Q9UNN5 650 aaPredicted RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 DIMT1Q9UNQ2 313 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 YBX2Q9Y2T7 364 aaKnown RBP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 MEMO1Q9Y316 297 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 TMED3Q9Y3Q3 217 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF175Q9Y473 711 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 HYOU1Q9Y4L1 999 aa4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 AQRO60306 1485 aaKnown RBP eCLIP4.56□□□□□ -1.68
TOPBP1-210ENST00000572787 RPAP1Q9BWH6 1393 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 PCDH11YQ9BZA8 1340 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 CENPXA8MT69 81 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 FAM90A26D6RGX4 464 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 E5RGE8 158 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 M0R3G1 203 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 HSBP1O75506 76 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 PRKRAO75569 313 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 ZMPSTE24O75844 475 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 BMP10O95393 424 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC35G4P0C7Q5 338 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 UNGP13051 313 aaPredicted RBP4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 ARSBP15848 533 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 PGAM1P18669 254 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 ATF6P18850 670 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 PMCHP20382 165 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 TBXA2RP21731 343 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 AADACP22760 399 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 GJB2P29033 226 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 RBMS1P29558 406 aaKnown RBP4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 ALDH3A1P30838 453 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 CCKBRP32239 447 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 KDELR2P33947 212 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 MAS1LP35410 378 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 HTR5AP47898 357 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 GNG10P50151 68 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 HSPA2P54652 639 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 RIPK4P57078 832 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 MLF1P58340 268 aa4.55□□□□□ -1.68
TOPBP1-210ENST00000572787 CD81P60033 236 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms