RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 FAM83FQ8NEG4 500 aaPredicted RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 NUP43Q8NFH3 380 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 OR2M3Q8NG83 312 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 GOT1L1Q8NHS2 421 aaPredicted RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 ZFP28Q8NHY6 868 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 OR5P2Q8WZ92 322 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 DUSP26Q9BV47 211 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 UGT2B28Q9BY64 529 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 ZNF385DQ9H6B1 395 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 MANSC1Q9H8J5 431 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 FAM120CQ9NX05 1096 aaKnown RBP7.89□□□□□ -1.15
SMG6-210ENST00000572205 GIN1Q9NXP7 522 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 SH3BP4Q9P0V3 963 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 KCNE5Q9UJ90 142 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 ABCG2Q9UNQ0 655 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 MAPRE3Q9UPY8 281 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 PCDHGB3Q9Y5G1 929 aa7.89□□□□□ -1.15
SMG6-210ENST00000572205 CACNA1DQ01668 2161 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 MPDZO75970 2070 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 MYO9AB2RTY4 2548 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 TRGV5A0A0B4J1U4 118 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 GOLGA8QA0A0J9YX86 632 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 A0A1W2PRB8 838 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 GOLGA8OA6NCC3 632 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CAPN14A8MX76 684 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 E9PBE3 544 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 NPIPA2E9PIF3 369 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 GOLGA8NF8WBI6 632 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 NPIPA3F8WFD2 350 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 RNASET2O00584 256 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 EMC8O43402 210 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ZIC3O60481 467 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OXSR1O95747 527 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 TPOP07202 933 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 GLI4P10075 376 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ABOP16442 354 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 BMP7P18075 431 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 LBPP18428 481 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 AGAP20933 346 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 PSMA4P25789 261 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 ELAVL4P26378 380 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 GDF1P27539 372 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 RPL3P39023 403 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 TRPC1P48995 793 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 LHX2P50458 406 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 MANFP55145 182 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 CLDN18P56856 261 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 NUP107P57740 925 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 RPS26P62854 115 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 PRR5P85299 388 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 MAD2L1Q13257 205 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 EFR3AQ14156 821 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 LASP1Q14847 261 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 GXYLT1Q4G148 440 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ACSF3Q4G176 576 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 WIPI1Q5MNZ9 446 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 CCNJQ5T5M9 372 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CPTPQ5TA50 214 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 SAXO2Q658L1 398 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ZNF787Q6DD87 383 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CGB2Q6NT52 195 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CDC73Q6P1J9 531 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 EPGNQ6UW88 154 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 RPTNQ6XPR3 784 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OLIG3Q7RTU3 272 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ULK2Q8IYT8 1036 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OR5D16Q8NGK9 328 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OR5M9Q8NGP3 310 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OR9I1Q8NGQ6 314 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 OR5AK3PQ8NH89 298 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 PPP1R14CQ8TAE6 165 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 PIWIL2Q8TC59 973 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ACTRT2Q8TDY3 377 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CDS1Q92903 461 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 RMND5BQ96G75 393 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 RHOVQ96L33 236 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 MARK4Q96L34 752 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 CCDC115Q96NT0 180 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 STACQ99469 402 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 TIMP4Q99727 224 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 PAIP2Q9BPZ3 127 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 EBF4Q9BQW3 602 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 TP63Q9H3D4 680 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 SDR39U1Q9NRG7 319 aaPredicted RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 DUSP22Q9NRW4 184 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
SMG6-210ENST00000572205 SLC6A5Q9Y345 797 aa7.88□□□□□ -1.15
SMG6-210ENST00000572205 A0A0G2JNJ9 132 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 TTC36A6NLP5 189 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 HMGB1P1B2RPK0 211 aaPredicted RBP7.87□□□□□ -1.15
SMG6-210ENST00000572205 ALG1L2C9J202 215 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 BCKDKO14874 412 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 KLF4O43474 513 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 SCO2O43819 266 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 BCAS1O75363 584 aaPredicted RBP7.87□□□□□ -1.15
SMG6-210ENST00000572205 REM1O75628 298 aa7.87□□□□□ -1.15
SMG6-210ENST00000572205 UTS2O95399 124 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms