RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 OR2AG2A6NM03 316 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 AGAP14A8MT82 685 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 D6RAR5 112 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 PTGES3LE9PB15 166 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 H7C0S8 307 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CCDC188H7C350 402 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 NR5A2O00482 541 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 DUX1O43812 170 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A9O60656 530 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CSO75390 466 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 POP7O75817 140 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 KRT14P02533 472 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 SLC35G4P0C7Q5 338 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 OR56A5P0C7T3 313 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 MLNP12872 115 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ATP1B2P14415 290 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 ZNF7P17097 686 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A6P19224 532 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TPSB2P20231 275 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A4P22310 534 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CBLP22681 906 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ITGA3P26006 1051 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 AK4P27144 223 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 NMBRP28336 390 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 RPL22P35268 128 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A3P35503 534 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A5P35504 534 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 COILP38432 576 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 NSG1P42857 185 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CD151P48509 253 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TTPAP49638 278 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ZNF140P52738 457 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 ERVPABLB-1P60509 514 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CCL7P80098 99 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 PLOD1Q02809 727 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 DMPKQ09013 629 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 RPA4Q13156 261 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TRA2AQ13595 282 aaKnown RBP eCLIP3.58□□□□□ -1.84
NUP88-202ENST00000570937 KRT33BQ14525 404 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TPSAB1Q15661 275 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 FASTKD1Q53R41 847 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 ZRANB3Q5FWF4 1079 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 GPRC6AQ5T6X5 926 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CASC4Q6P4E1 433 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 LRRC8BQ6P9F7 803 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CYB5D1Q6P9G0 228 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TMEM220Q6QAJ8 160 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 WDR74Q6RFH5 385 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 AFTPHQ6ULP2 937 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ABRAXAS1Q6UWZ7 409 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 KDM7AQ6ZMT4 941 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 LRRC6Q86X45 466 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 KRTAP7-1Q8IUC3 87 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 SLC35F6Q8N357 371 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 SFRP1Q8N474 314 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TTC30BQ8N4P2 665 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 OTUD6BQ8N6M0 293 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 PRELID2Q8N945 189 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 RASGEF1AQ8N9B8 481 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 Q8N9G6 341 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 MCUQ8NE86 351 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 OR52K1Q8NGK4 314 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 OR2L2Q8NH16 312 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 OR4L1Q8NH43 312 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CCL4L1Q8NHW4 92 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 WDR36Q8NI36 951 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 WDR20Q8TBZ3 569 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CXorf40BQ96DE9 158 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TRIM44Q96DX7 344 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 SGF29Q96ES7 293 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 CDKN2AIPNLQ96HQ2 116 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 MS4A14Q96JA4 679 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ZNF578Q96N58 590 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 ZNF582Q96NG8 517 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 NAPGQ99747 312 aaPredicted RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 AP1M1Q9BXS5 423 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UCK1Q9HA47 277 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A7Q9HAW7 530 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A10Q9HAW8 530 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 UGT1A8Q9HAW9 530 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 TBC1D29Q9UFV1 150 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 KCNK6Q9Y257 313 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 HEBP2Q9Y5Z4 205 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 RNF215Q9Y6U7 377 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 BPTFQ12830 3046 aa3.58□□□□□ -1.84
NUP88-202ENST00000570937 ASCC3Q8N3C0 2202 aaKnown RBP3.58□□□□□ -1.84
NUP88-202ENST00000570937 PCNX2A6NKB5 2137 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MAGEB17A8MXT2 336 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 H3BMM5 538 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 LIN7AO14910 233 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 TO15178 435 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 TOX3O15405 576 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 B4GAT1O43505 415 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 MTX2O75431 263 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 RSL1D1O76021 490 aaKnown RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 TNFSF15O95150 251 aa3.57□□□□□ -1.84
NUP88-202ENST00000570937 NADKO95544 446 aaPredicted RBP3.57□□□□□ -1.84
NUP88-202ENST00000570937 TTC4O95801 387 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms