RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 KLF6Q99612 283 aaPredicted RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 DUSP26Q9BV47 211 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 NTMT1Q9BV86 223 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 CALN1Q9BXU9 219 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 SLC17A9Q9BYT1 436 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 SCAND2PQ9GZW5 306 aaPredicted RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 MIS12Q9H081 205 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 LRMDAQ9H2I8 198 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 KLK15Q9H2R5 256 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 TOR3AQ9H497 397 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 ACTR8Q9H981 624 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 DYRK4Q9NR20 520 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 FAM207AQ9NSI2 230 aaPredicted RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 TMEM184CQ9NVA4 438 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 DDIT4Q9NX09 232 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 COPS7AQ9UBW8 275 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 ATP6V1HQ9UI12 483 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 CNOT11Q9UKZ1 510 aaKnown RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 SATB2Q9UPW6 733 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 ATP6V1DQ9Y5K8 247 aa2.91□□□□□ -1.94
CNOT1-221ENST00000569924 USP9YO00507 2555 aaPredicted RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 SPTAN1Q13813 2472 aaKnown RBP2.91□□□□□ -1.94
CNOT1-221ENST00000569924 NBASA2RRP1 2371 aa2.9□□□□□ -1.94
CNOT1-221ENST00000569924 DOPEY2Q9Y3R5 2298 aa2.9□□□□□ -1.94
CNOT1-221ENST00000569924 IGLV3-10A0A075B6K4 115 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 IGHV4-28A0A0C4DH34 117 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 A0A0U1RQV5 110 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM89A2RUT3 159 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZSCAN5BA6NJL1 495 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 LMO7DNF2Z398 122 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 H0YC42 278 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 H3BMM5 538 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 K7ERQ8 282 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NTN3O00634 580 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GAPDHSO14556 408 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 FPGTO14772 594 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 RAD51BO15315 384 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NVLO15381 856 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SMAD6O43541 496 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SNAP91O60641 907 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CNOT3O75175 753 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GRAP2O75791 330 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZMPSTE24O75844 475 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NEBLO76041 1014 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TNFSF15O95150 251 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SMC2O95347 1197 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GNA14O95837 355 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PAK4O96013 591 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CALCAP01258 141 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 RAF1P04049 648 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 RHOCP08134 193 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GZMAP12544 262 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ADRB3P13945 408 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 MAKP20794 623 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CASQ1P31415 396 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 STIP1P31948 543 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 FCGR2BP31994 310 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PPP1R2P41236 205 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NKX2-1P43699 371 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 NR0B1P51843 470 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PDX1P52945 283 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PFN3P60673 137 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PITX1P78337 314 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CX3CL1P78423 397 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF91Q05481 1191 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 KLC1Q07866 573 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SRSF1Q07955 248 aaKnown RBP eCLIP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 FUT7Q11130 342 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 MSLNQ13421 630 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TMED1Q13445 227 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 FOXE3Q13461 319 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PNOCQ13519 176 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GPR18Q14330 331 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZMYND11Q15326 602 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PDK4Q16654 411 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PHKG1Q16816 387 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TPD52L1Q16890 204 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 DEFB133Q30KQ1 61 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 LSM12Q3MHD2 195 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 LINC00303Q3SY05 128 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 KCTD21Q4G0X4 260 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF542PQ5EBM4 170 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CARD16Q5EG05 197 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 BRMS1LQ5PSV4 323 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 IL23RQ5VWK5 629 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SEL1L3Q68CR1 1132 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TYW3Q6IPR3 259 aaKnown RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TTC27Q6P3X3 843 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 GUSBP11Q6P575 273 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 OLFML1Q6UWY5 402 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 LRRC31Q6UY01 552 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 PACS1Q6VY07 963 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF704Q6ZNC4 412 aaPredicted RBP2.9□□□□□ -1.95
CNOT1-221ENST00000569924 CDHR3Q6ZTQ4 885 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 SLC26A9Q7LBE3 791 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 TAS2R42Q7RTR8 314 aa2.9□□□□□ -1.95
CNOT1-221ENST00000569924 EFL1Q7Z2Z2 1120 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms