RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PRAMEF7Q5VXH5 474 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 FAM71E2Q8N5Q1 922 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 HASPINQ8TF76 798 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MITD1Q8WV92 249 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GNPNAT1Q96EK6 184 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 OCEL1Q9H607 264 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PLEKHA2Q9HB19 425 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 Q9N2J8 555 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 C1orf123Q9NWV4 160 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 NDUFB11Q9NX14 153 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GRHPRQ9UBQ7 328 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 USP21Q9UK80 565 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 LRIT2A6NDA9 550 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 M0R143 59 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MAKP20794 623 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CTNNB1P35222 781 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 STK19P49842 368 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SUOXP51687 545 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 RIDAP52758 137 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 UBE2MP61081 183 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 MFGE8Q08431 387 aaPredicted RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 GUK1Q16774 197 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 AMZ2Q86W34 360 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 PELI3Q8N2H9 469 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 WFIKKN2Q8TEU8 576 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 BORCS7Q96B45 105 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ZDHHC6Q9H6R6 413 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ARNT2Q9HBZ2 717 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 SLC6A20Q9NP91 592 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 ENY2Q9NPA8 101 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 EPHA6Q9UF33 1036 aa6.74□□□□□ -1.33
CNOT1-216ENST00000569240 NDRG4Q9ULP0 352 aaKnown RBP6.74□□□□□ -1.33
CNOT1-216ENST00000569240 CD8B2A6NJW9 211 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 GABRPO00591 440 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 GPR37L1O60883 481 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ZBTB7AO95365 584 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CST3P01034 146 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 GBAP04062 536 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CD8BP10966 210 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CXCR1P25024 350 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 KCNC1P48547 511 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 DLK1P80370 383 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PPA1Q15181 289 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 RGNQ15493 299 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ISCA2Q86U28 154 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ZMIZ2Q8NF64 920 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 OR5AK2Q8NH90 309 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NANPQ8TBE9 248 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SUSD6Q92537 303 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 RASD1Q9Y272 281 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 DCCP43146 1447 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 WASH3PC4AMC7 463 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HPGDSO60760 199 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SCGB2A1O75556 95 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 LAP3P28838 519 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CCKARP32238 428 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CX3CR1P49238 355 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SRP9P49458 86 aaKnown RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 FLYWCH1Q4VC44 716 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 IGSF11Q5DX21 431 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM244Q5VVB8 128 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CES4AQ5XG92 561 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 GPC2Q8N158 579 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 OR5M8Q8NGP6 311 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 OR13C2Q8NGS9 318 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PTP4A1Q93096 173 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 RBM18Q96H35 190 aaKnown RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 C1QTNF2Q9BXJ5 285 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TM6SF2Q9BZW4 377 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 MAP10Q9P2G4 905 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TRAV18A0A075B6X5 111 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 LNP1A1A4G5 178 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TRABD2BA6NFA1 517 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 SOX14O95416 240 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 OPN1SWP03999 348 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HOXB9P17482 250 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 AHCYP23526 432 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 AQP2P41181 271 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TAF9Q16594 264 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ARRDC4Q8NCT1 418 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-216ENST00000569240 C20orf85Q9H1P6 137 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 CLMPQ9H6B4 373 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PTGES2Q9H7Z7 377 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 BPIFA1Q9NP55 256 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 RLIMQ9NVW2 624 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 MED9Q9NWA0 146 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF586Q9NXT0 402 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HSFX1Q9UBD0 423 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PIK3C2BO00750 1634 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 PPP5D1E7EU14 171 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 NCR1O76036 304 aa6.73□□□□□ -1.33
CNOT1-216ENST00000569240 HSD11B1P28845 292 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms