RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 OLIG3Q7RTU3 272 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 FGD2Q7Z6J4 655 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 WDSUB1Q8N9V3 476 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
CDT1-203ENST00000569140 OR4C3Q8NH37 302 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 GOT1L1Q8NHS2 421 aaPredicted RBP11.68□□□□□ -0.54
CDT1-203ENST00000569140 FAM57AQ8TBR7 257 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 SH3YL1Q96HL8 342 aaPredicted RBP11.68□□□□□ -0.54
CDT1-203ENST00000569140 DSN1Q9H410 356 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 MED11Q9P086 117 aa11.68□□□□□ -0.54
CDT1-203ENST00000569140 ERRFI1Q9UJM3 462 aaPredicted RBP11.68□□□□□ -0.54
CDT1-203ENST00000569140 RPH3AQ9Y2J0 694 aaPredicted RBP11.68□□□□□ -0.54
CDT1-203ENST00000569140 NCKAP5O14513 1909 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 AQP7O14520 342 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 ANGPT2O15123 496 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 SUSD5O60279 629 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 HCN1O60741 890 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 STX11O75558 287 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 AK1P00568 194 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 IGHG3P01860 377 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 CAPN3P20807 821 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 TBXA2RP21731 343 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 LCN1P31025 176 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 CA7P43166 264 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 MRPL19P49406 292 aaKnown RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 COX20Q5RI15 118 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDT1-203ENST00000569140 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 FUNDC1Q8IVP5 155 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 NEIL3Q8TAT5 605 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 FAM110BQ8TC76 370 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 PHOSPHO1Q8TCT1 267 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 DUSP19Q8WTR2 217 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 SSC4DQ8WTU2 575 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 STON2Q8WXE9 905 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 AURKBQ96GD4 344 aaPredicted RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 RTN4RQ9BZR6 473 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 NSRP1Q9H0G5 558 aaKnown RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 UBQLN3Q9H347 655 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 PTGES2Q9H7Z7 377 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 SLC6A13Q9NSD5 602 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 PNPLA3Q9NST1 481 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 TAS2R10Q9NYW0 307 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 KLHL14Q9P2G3 628 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 SPRR3Q9UBC9 169 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
CDT1-203ENST00000569140 NINQ8N4C6 2090 aa11.67□□□□□ -0.54
CDT1-203ENST00000569140 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 FAM47E-STBD1D6RA91 191 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 H3BNH8 94 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 GTPBP1O00178 669 aaKnown RBP11.66□□□□□ -0.54
CDT1-203ENST00000569140 BCKDKO14874 412 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 CYP7B1O75881 506 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 NUDT14O95848 222 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 HPNP05981 417 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 NR2F1P10589 423 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 HK1P19367 917 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ENDOUP21128 410 aaKnown RBP11.66□□□□□ -0.54
CDT1-203ENST00000569140 DPP4P27487 766 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 GAS1P54826 345 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 GNGT1P63211 74 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDT1-203ENST00000569140 C17orf67Q0P5P2 114 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ARHGAP11BQ3KRB8 267 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 RAET1LQ5VY80 246 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 METTL21CQ5VZV1 264 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 APOOLQ6UXV4 268 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 Q6ZPB1 254 aaPredicted RBP11.66□□□□□ -0.54
CDT1-203ENST00000569140 HMGN2P46Q86SG4 172 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 EID3Q8N140 333 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 OR2M3Q8NG83 312 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 MIPOL1Q8TD10 442 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ZFP90Q8TF47 636 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 GTF2H4Q92759 462 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ROPN1LQ96C74 230 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 SFXN2Q96NB2 322 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 SDF2Q99470 211 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 HOXD1Q9GZZ0 328 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
CDT1-203ENST00000569140 MKLN1Q9UL63 735 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 CAMK2AQ9UQM7 478 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 ZNF835Q9Y2P0 537 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 WDR45Q9Y484 360 aa11.66□□□□□ -0.54
CDT1-203ENST00000569140 A0A096LPI6 279 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 A0A1B0GVC2 190 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 TMEM247A6NEH6 219 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 FIGNL2A6NMB9 653 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 HMGN4O00479 90 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 HCRTR2O43614 444 aa11.65□□□□□ -0.54
CDT1-203ENST00000569140 TNFRSF21O75509 655 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms