RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FAM120CQ9NX05 1096 aaKnown RBP7.69□□□□□ -1.18
SMG1-216ENST00000569122 SLC17A6Q9P2U8 582 aa7.69□□□□□ -1.18
SMG1-216ENST00000569122 FBXO9Q9UK97 447 aaPredicted RBP7.69□□□□□ -1.18
SMG1-216ENST00000569122 CES1P1Q9UKY3 287 aa7.69□□□□□ -1.18
SMG1-216ENST00000569122 ACOT9Q9Y305 439 aa7.69□□□□□ -1.18
SMG1-216ENST00000569122 CR1P17927 2039 aa7.69□□□□□ -1.18
SMG1-216ENST00000569122 MED12Q93074 2177 aa7.69□□□□□ -1.18
SMG1-216ENST00000569122 IGLV3-32A0A0A0MS00 114 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 GOLGA6L10A0A0M3HER8 536 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 GJE1A6NN92 205 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 VWC2LB2RUY7 222 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TRIM77I1YAP6 450 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 CXCL13O43927 109 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 FADS1O60427 444 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 COQ9O75208 318 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 PRKD3O94806 890 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 YES1P07947 543 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 PCSK2P16519 638 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 ZNF23P17027 643 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 GGT1P19440 569 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 ELK3P41970 407 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 LIMS1P48059 325 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 FNTAP49354 379 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TRA2BP62995 288 aaKnown RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 STX5Q13190 355 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 OR4D1Q15615 310 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 CPSF6Q16630 551 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMG1-216ENST00000569122 DECR1Q16698 335 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TMEM44Q2T9K0 475 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 STEAP4Q687X5 459 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 METTL2BQ6P1Q9 378 aaKnown RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 TTC27Q6P3X3 843 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TRMT10BQ6PF06 316 aaKnown RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 GTPBP8Q8N3Z3 284 aaPredicted RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 RNF175Q8N4F7 328 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 SPATA6LQ8N4H0 392 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 FAM216AQ8WUB2 273 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 CDKL2Q92772 493 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 OSTF1Q92882 214 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 HPS1Q92902 700 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 CPNE4Q96A23 557 aaPredicted RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 EFHD2Q96C19 240 aaPredicted RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 ADGRG7Q96K78 797 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 VSTM2LQ96N03 204 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 JMJD8Q96S16 334 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 DESI2Q9BSY9 194 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 INPP5KQ9BT40 448 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TRMOQ9BU70 441 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 RBM4Q9BWF3 364 aaKnown RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 PRR14Q9BWN1 585 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TBL1XR1Q9BZK7 514 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 SHCBP1LQ9BZQ2 653 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 FKRPQ9H9S5 495 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 NMRAL1Q9HBL8 299 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 MYNNQ9NPC7 610 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 PFDN4Q9NQP4 134 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 GIMAP4Q9NUV9 329 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 NMRK1Q9NWW6 199 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 KLHL13Q9P2N7 655 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 NFU1Q9UMS0 254 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 TNPO3Q9Y5L0 923 aaKnown RBP7.68□□□□□ -1.18
SMG1-216ENST00000569122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMG1-216ENST00000569122 FREM1Q5H8C1 2179 aa7.68□□□□□ -1.18
SMG1-216ENST00000569122 C7orf72A4D263 438 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 SUPT3HB4E1H0 165 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 E7EQL1 145 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 DNALI1O14645 258 aaPredicted RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 TNFSF11O14788 317 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 SMAD9O15198 467 aaKnown RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 PHGDHO43175 533 aaKnown RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 KERAO60938 352 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 SUPT3HO75486 399 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 SNUPNO95149 360 aaKnown RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 CLDN9O95484 217 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 IL33O95760 270 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 PTNP21246 168 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 APOBEC3AP31941 199 aaPredicted RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 MPIP34949 423 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 EIF1P41567 113 aaKnown RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 CORO7P57737 925 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 DEFA6Q01524 100 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 IFT88Q13099 833 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 MORF4L2Q15014 288 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 ZNHIT3Q15649 155 aaPredicted RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 TSC22D1Q15714 1073 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 MSS51Q4VC12 460 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 ARL13AQ5H913 290 aaPredicted RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 C1QTNF12Q5T7M4 302 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 TTC19Q6DKK2 380 aaPredicted RBP7.67□□□□□ -1.18
SMG1-216ENST00000569122 DEF8Q6ZN54 512 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 TRABD2AQ86V40 505 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 IGDCC3Q8IVU1 814 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 TUSC5Q8IXB3 177 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 LRRC17Q8N6Y2 441 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 CDYL2Q8N8U2 506 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 LINC01356Q8N9X3 169 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 L3MBTL4Q8NA19 623 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 OR2W6PQ8NHA6 318 aa7.67□□□□□ -1.18
SMG1-216ENST00000569122 WDR20Q8TBZ3 569 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms