RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 AMDHD1Q96NU7 426 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 NPAS1Q99742 590 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 TBL1XR1Q9BZK7 514 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 GSTO2Q9H4Y5 243 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 MID1IP1Q9NPA3 183 aa13.93□□□□□ -0.18
NME3-211ENST00000568561 STAB1Q9NY15 2570 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 UBFD1O14562 309 aaKnown RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 URI1O94763 535 aaPredicted RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 CNOT4O95628 575 aaKnown RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 PRKAA2P54646 552 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 PKNOX1P55347 436 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 RPS3AP61247 264 aaKnown RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 ZNHIT3Q15649 155 aaPredicted RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 GRAMD1BQ3KR37 738 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 PRSS57Q6UWY2 283 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 ZNF551Q7Z340 670 aaPredicted RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 EXOC3L1Q86VI1 746 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 CCNYL1Q8N7R7 359 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 LRRN4CLQ8ND94 238 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 FBXO30Q8TB52 745 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
NME3-211ENST00000568561 ELP4Q96EB1 424 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 L3HYPDHQ96EM0 354 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 PRRG4Q9BZD6 226 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 GSX2Q9BZM3 304 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 MYNNQ9NPC7 610 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 NFU1Q9UMS0 254 aa13.92□□□□□ -0.18
NME3-211ENST00000568561 FREM1Q5H8C1 2179 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 LINC01387J3KSC0 135 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 KLF4O43474 513 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 PLGP00747 810 aaPredicted RBP13.91□□□□□ -0.18
NME3-211ENST00000568561 FCGR2AP12318 317 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 GABRA3P34903 492 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 CLK3P49761 638 aaKnown RBP13.91□□□□□ -0.18
NME3-211ENST00000568561 NR1H2P55055 460 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 HSPB3Q12988 150 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 FGFBP1Q14512 234 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 IMPG1Q17R60 797 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 TMEM44Q2T9K0 475 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 ALKBH2Q6NS38 261 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 ANKRD26P1Q6NSI1 321 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 STAC2Q6ZMT1 411 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 ZNF704Q6ZNC4 412 aaPredicted RBP13.91□□□□□ -0.18
NME3-211ENST00000568561 PLEKHM3Q6ZWE6 761 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 WFDC8Q8IUA0 241 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 MMGT1Q8N4V1 131 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 CEP112Q8N8E3 955 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 OR10D3Q8NH80 312 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.91□□□□□ -0.18
NME3-211ENST00000568561 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 CAVIN3Q969G5 261 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 LMF2Q9BU23 707 aaKnown RBP13.91□□□□□ -0.18
NME3-211ENST00000568561 SHCBP1LQ9BZQ2 653 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 TSPYL1Q9H0U9 437 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 TMEM185BQ9H7F4 350 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 SIRT5Q9NXA8 310 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 STK38LQ9Y2H1 464 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 EMC9Q9Y3B6 208 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 AP4B1Q9Y6B7 739 aa13.91□□□□□ -0.18
NME3-211ENST00000568561 CCDC151A5D8V7 595 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 CXCL13O43927 109 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 CTBP2P56545 445 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 PRR5P85299 388 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 PPP2R2BQ00005 443 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.9□□□□□ -0.18
NME3-211ENST00000568561 BEX5Q5H9J7 111 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 TIFABQ6ZNK6 161 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 SLC22A9Q8IVM8 553 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 OR6K3Q8NGY3 331 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 TMEM171Q8WVE6 324 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
NME3-211ENST00000568561 PLPPR2Q96GM1 343 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 EGLN2Q96KS0 407 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 C16orf45Q96MC5 204 aaPredicted RBP13.9□□□□□ -0.18
NME3-211ENST00000568561 TNFRSF12AQ9NP84 129 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 MRTO4Q9UKD2 239 aaKnown RBP13.9□□□□□ -0.18
NME3-211ENST00000568561 ADAM21Q9UKJ8 722 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 GRID1Q9ULK0 1009 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 PTGDR2Q9Y5Y4 395 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 MXRA5Q9NR99 2828 aa13.9□□□□□ -0.18
NME3-211ENST00000568561 IGLV3-32A0A0A0MS00 114 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 SS18L1O75177 396 aaPredicted RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 SLITRK5O94991 958 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 GSTM5P46439 218 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 PSMD4P55036 377 aaKnown RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 C17orf67Q0P5P2 114 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 CTU2Q2VPK5 515 aaKnown RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 NOXRED1Q6NXP6 359 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 FIGNL1Q6PIW4 674 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 SZRD1Q7Z422 152 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 ZAR1Q86SH2 424 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 GPR151Q8TDV0 419 aa13.89□□□□□ -0.19
NME3-211ENST00000568561 CIDECQ96AQ7 238 aaPredicted RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 SH3YL1Q96HL8 342 aaPredicted RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 GMPPAQ96IJ6 420 aaPredicted RBP13.89□□□□□ -0.19
NME3-211ENST00000568561 ADGRG7Q96K78 797 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms