RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RBM18Q96H35 190 aaKnown RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 LMF2Q9BU23 707 aaKnown RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 TSSK6Q9BXA6 273 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 POLR2J2Q9GZM3 115 aaKnown RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 CHRNA10Q9GZZ6 450 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 PDE7BQ9NP56 450 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 UCKL1Q9NWZ5 548 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 PCDH15Q96QU1 1955 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 CACNA1IQ9P0X4 2223 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 KCNK2O95069 426 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 PRG2P13727 222 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 BCKDHBP21953 392 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 FNTBP49356 437 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 RGS6P49758 472 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 CLK1P49759 484 aaKnown RBP16.84■□□□□ 0.29
SMPD3-211ENST00000568373 MED22Q15528 200 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 TCTE1Q5JU00 501 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 SLC36A4Q6YBV0 504 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 TMEM80Q96HE8 168 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 LRR1Q96L50 414 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 OR5M11Q96RB7 305 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 RAB33BQ9H082 229 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 TBC1D17Q9HA65 648 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 FOLH1BQ9HBA9 442 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 PRTFDC1Q9NRG1 225 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 EPHA6Q9UF33 1036 aa16.84■□□□□ 0.29
SMPD3-211ENST00000568373 TRAPPC13A5PLN9 417 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 RHPN2P1A8MT19 583 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 CLDN4O14493 209 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 KLF4O43474 513 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 PIAS2O75928 621 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 GKN3PP0CG01 181 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 HSMCR30P0CW71 290 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 HTR2AP28223 471 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 CSTF2P33240 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMPD3-211ENST00000568373 STAT5AP42229 794 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 EMDP50402 254 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 EPHA4P54764 986 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 PSG6Q00889 435 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 LINC00299Q6ZSB3 139 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 CLDN23Q96B33 292 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 ZHX1-C8orf76Q96EF9 292 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 ZDHHC12Q96GR4 267 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 MGLLQ99685 303 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 ALOXE3Q9BYJ1 711 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 ARMC7Q9H6L4 198 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 CAPN10Q9HC96 672 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 CLDN16Q9Y5I7 305 aa16.83■□□□□ 0.28
SMPD3-211ENST00000568373 FMO6PO60774 539 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 NADKO95544 446 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 RPLP0P05388 317 aaKnown RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 TGFBR1P36897 503 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 GPR4P46093 362 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 SERPINB10P48595 397 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 ERV3-1Q14264 604 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 NR1D2Q14995 579 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 ZNHIT3Q15649 155 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 NKAIN2Q5VXU1 208 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 ZAR1Q86SH2 424 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 SLC15A4Q8N697 577 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 POGLUT1Q8NBL1 392 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 MAFAQ8NHW3 353 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 TMEM163Q8TC26 289 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 DNASE2BQ8WZ79 361 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 OSTF1Q92882 214 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 MMABQ96EY8 250 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 VMP1Q96GC9 406 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF582Q96NG8 517 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 CD180Q99467 661 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 NLGN3Q9NZ94 848 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 FITM1A5D6W6 292 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 PIP5K1CO60331 668 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 SSTR4P31391 388 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 OPRL1P41146 370 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 C21orf59P57076 290 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 BTG2P78543 158 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 RHAGQ02094 409 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 FLYWCH1Q4VC44 716 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 RNLSQ5VYX0 342 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 VSTM2LQ96N03 204 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 DGAT2Q96PD7 388 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 SLC38A2Q96QD8 506 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 PRSS27Q9BQR3 290 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 PRRG3Q9BZD7 231 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 KRCC1Q9NPI7 259 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 TBC1D23Q9NUY8 699 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 IL20Q9NYY1 176 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 TESQ9UGI8 421 aaKnown RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 OSGIN1Q9UJX0 560 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 ERGIC3Q9Y282 383 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 RNF215Q9Y6U7 377 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 PMF1-BGLAPU3KQ54 211 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 EML5Q05BV3 1969 aa16.82■□□□□ 0.28
SMPD3-211ENST00000568373 TP53BP1Q12888 1972 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-211ENST00000568373 HRKO00198 91 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 STK25O00506 426 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF749O43361 778 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms