RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CPA3P15088 417 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 PPP3CBP16298 524 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 ZNF17P17021 662 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 ME2P23368 584 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 RPL3P39023 403 aaKnown RBP16.79■□□□□ 0.28
LINC01238-205ENST00000567549 ASMTP46597 345 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 B3GALT5-AS1P59052 145 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 PRR5P85299 388 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 FAM153CQ494X1 144 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 LIPMQ5VYY2 423 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 R3HCC1LQ7Z5L2 792 aaKnown RBP16.79■□□□□ 0.28
LINC01238-205ENST00000567549 P3H2Q8IVL5 708 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 OR6Y1Q8NGX8 325 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 GPR151Q8TDV0 419 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 DUSP19Q8WTR2 217 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 PPCDCQ96CD2 204 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 LRTM1Q9HBL6 345 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 GLRX2Q9NS18 164 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 OXSMQ9NWU1 459 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 MED11Q9P086 117 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 MCTS1Q9ULC4 181 aaKnown RBP16.79■□□□□ 0.28
LINC01238-205ENST00000567549 PROCRQ9UNN8 238 aa16.79■□□□□ 0.28
LINC01238-205ENST00000567549 IGLV3-32A0A0A0MS00 114 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 OR2M5A3KFT3 312 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 TBX19O60806 448 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 UTS2O95399 124 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 ANGPTL1O95841 491 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 PROCP04070 461 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 NGFRP08138 427 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 MAPK1P28482 360 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 GABRA3P34903 492 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 SERPINB4P48594 390 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 ZNF41P51814 821 aaPredicted RBP16.78■□□□□ 0.28
LINC01238-205ENST00000567549 MANFP55145 182 aaKnown RBP16.78■□□□□ 0.28
LINC01238-205ENST00000567549 FOXA1P55317 472 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 HSPB3Q12988 150 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 PON3Q15166 354 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 GTF2IRD2BQ6EKJ0 949 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 ZCCHC12Q6PEW1 402 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 RNF165Q6ZSG1 346 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 SZRD1Q7Z422 152 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 GTF2IRD2Q86UP8 949 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 TDRPQ86YL5 185 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 WDR75Q8IWA0 830 aaKnown RBP16.78■□□□□ 0.28
LINC01238-205ENST00000567549 LRRC75A-AS1Q8N1F1 130 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 METTL25Q8N6Q8 603 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 STARD4Q96DR4 205 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 MTERF3Q96E29 417 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 C18orf12Q96KH6 178 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 MS4A4EQ96PG1 132 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 REEP4Q9H6H4 257 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 RNF122Q9H9V4 155 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 ACSS1Q9NUB1 689 aaPredicted RBP16.78■□□□□ 0.28
LINC01238-205ENST00000567549 ZNF337Q9Y3M9 751 aa16.78■□□□□ 0.28
LINC01238-205ENST00000567549 TMEM114B3SHH9 223 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 UBFD1O14562 309 aaKnown RBP16.77■□□□□ 0.28
LINC01238-205ENST00000567549 NDUFB5O43674 189 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 PLIN3O60664 434 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 SMPD2O60906 423 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 SYNGR4O95473 234 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 ADSLP30566 484 aaPredicted RBP16.77■□□□□ 0.28
LINC01238-205ENST00000567549 UGT2B10P36537 528 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 CTBP2P56545 445 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 SIRPAP78324 504 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 NKX6-1P78426 367 aaPredicted RBP16.77■□□□□ 0.28
LINC01238-205ENST00000567549 POU4F3Q15319 338 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 LRIG3Q6UXM1 1119 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 C20orf204Q6ZNR8 217 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 FAM214BQ7L5A3 538 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 MARCH3Q86UD3 253 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 STK32CQ86UX6 486 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 NATD1Q8N6N6 113 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 MZB1Q8WU39 189 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 UBLCP1Q8WVY7 318 aaPredicted RBP16.77■□□□□ 0.28
LINC01238-205ENST00000567549 ZBTB8AQ96BR9 441 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 EML4Q9HC35 981 aaKnown RBP16.77■□□□□ 0.28
LINC01238-205ENST00000567549 EQTNQ9NQ60 294 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 EMCNQ9ULC0 261 aa16.77■□□□□ 0.28
LINC01238-205ENST00000567549 ALG1L2C9J202 215 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 AZIN1O14977 448 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 SASH3O75995 380 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 PABPC4LP0CB38 370 aaKnown RBP16.76■□□□□ 0.27
LINC01238-205ENST00000567549 CD53P19397 219 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 CRYGSP22914 178 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 HOXC12P31275 282 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 PRIM2P49643 509 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 CLDN15P56746 228 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 VWA1Q6PCB0 445 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 OR6K3Q8NGY3 331 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 SLC9A6Q92581 669 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 REXO5Q96IC2 774 aaKnown RBP16.76■□□□□ 0.27
LINC01238-205ENST00000567549 GMPPAQ96IJ6 420 aaPredicted RBP16.76■□□□□ 0.27
LINC01238-205ENST00000567549 TXLNGYQ9BZA5 131 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 DLL4Q9NR61 685 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 FAM53CQ9NYF3 392 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 SH3BP4Q9P0V3 963 aa16.76■□□□□ 0.27
LINC01238-205ENST00000567549 A0A1W2PPM1 405 aa16.75■□□□□ 0.27
LINC01238-205ENST00000567549 SCDO00767 359 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms