RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PCDHGB3Q9Y5G1 929 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
SF3B3-206ENST00000565990 CACNA1GO43497 2377 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 K7EM74 188 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 TSPAN2O60636 221 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PGM3O95394 542 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 WDPCPO95876 746 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 AGR2O95994 175 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ALPPP05187 535 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ATP6V1B2P21281 511 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ABCD3P28288 659 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 CHI3L1P36222 383 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PIGAP37287 484 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 GZMMP51124 257 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 SSR4P51571 173 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 NRG3P56975 720 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RAPSNQ13702 412 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 NFYCQ13952 458 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RGNQ15493 299 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 COX20Q5RI15 118 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 C6orf52Q5T4I8 152 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 HEPHL1Q6MZM0 1159 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 NANOGP8Q6NSW7 305 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 OPN5Q6U736 354 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PCSK4Q6UW60 755 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 LINC00696Q6ZRV3 163 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 NUP54Q7Z3B4 507 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 WDR53Q7Z5U6 358 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RNF130Q86XS8 419 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ADGRG5Q8IZF4 528 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 SLC34A3Q8N130 599 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 GALNT4Q8N4A0 578 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 HORMAD2Q8N7B1 307 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RNF148Q8N7C7 305 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 EXD3Q8N9H8 876 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 SLC22A8Q8TCC7 542 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 GPR151Q8TDV0 419 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ADAMTS15Q8TE58 950 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 CANT1Q8WVQ1 401 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PPP1R14BQ96C90 147 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 SLC35G5Q96KT7 338 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 SGCZQ96LD1 299 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 GAL3ST4Q96RP7 486 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 CPPED1Q9BRF8 314 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 YIPF4Q9BSR8 244 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 BTBD2Q9BX70 525 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PCDHAC1Q9H158 963 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 OR51I1Q9H343 314 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RAD21L1Q9H4I0 556 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 NANOGQ9H9S0 305 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 THUMPD1Q9NXG2 353 aaKnown RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 RSL24D1Q9UHA3 163 aaKnown RBP11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 PACSIN3Q9UKS6 424 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 CBLCQ9ULV8 474 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
SF3B3-206ENST00000565990 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 PRAMEF27A3QJZ7 478 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 OR6C70A6NIJ9 312 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 A8MVJ9 347 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ERVH48-1M5A8F1 160 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 HMGN4O00479 90 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ARPC2O15144 300 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 NEURL1O76050 574 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 OR6B1O95007 311 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 KCNK2O95069 426 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 IL33O95760 270 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 HPRP00739 348 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 PDGFAP04085 211 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SFTPCP11686 197 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SOAT1P35610 550 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 CYB561P49447 251 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 NUP107P57740 925 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 RPS26P62854 115 aaKnown RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ZNF155Q12901 538 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 FADDQ13158 208 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 KCNAB2Q13303 367 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TUBA3CQ13748 450 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 NTRK2Q16620 822 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 ARHGAP11BQ3KRB8 267 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SLC36A3Q495N2 470 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TUBA3EQ6PEY2 450 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 DHRS4L2Q6PKH6 230 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 CROCCP3Q8IVE0 287 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 TMEM156Q8N614 296 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 BCORP1Q8N888 145 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 MDS2Q8NDY4 140 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 CHDHQ8NE62 594 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-206ENST00000565990 OR8J3Q8NGG0 315 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 OR5D16Q8NGK9 328 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 RNF138Q8WVD3 245 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 PIK3R3Q92569 461 aa11.61□□□□□ -0.55
SF3B3-206ENST00000565990 SLC9A6Q92581 669 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms