RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 LRRC31Q6UY01 552 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 C4orf22Q6V702 233 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ZNF562Q6V9R5 426 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TRMT1LQ7Z2T5 733 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 DHFR2Q86XF0 187 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 KLHDC8AQ8IYD2 350 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TMEM199Q8N511 208 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ZNF561Q8N587 486 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 FAM89BQ8N5H3 189 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OR51G2Q8NGK0 314 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 HM13Q8TCT9 377 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 PPP4R1Q8TF05 950 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TM9SF4Q92544 642 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 RSPRY1Q96DX4 576 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 PRR11Q96HE9 360 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 FOXB1Q99853 325 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OMDQ99983 421 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 KLHDC3Q9BQ90 382 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 VPS25Q9BRG1 176 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TIPINQ9BVW5 301 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ZDHHC6Q9H6R6 413 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 RNF121Q9H920 327 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 MYNNQ9NPC7 610 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 GPR83Q9NYM4 423 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 MRM2Q9UI43 246 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 ZNF223Q9UK11 482 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 IKZF3Q9UKT9 509 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 MAB21L2Q9Y586 359 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 MUC6Q6W4X9 2439 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ASH1LQ9NR48 2969 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 MICAL3Q7RTP6 2002 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OR6C68A6NDL8 312 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 DRGXA6NNA5 263 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CCDC188H7C350 402 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 PLPP1O14494 284 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NKX2-8O15522 239 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CTIFO43310 598 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 MBTPS2O43462 519 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 SLC28A2O43868 658 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 UGDHO60701 494 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 MAGEC1O60732 1142 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 UPK3AO75631 287 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 SCGNO76038 276 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NFATC1O95644 943 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 INHBBP09529 407 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NQO1P15559 274 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 HLA-GP17693 338 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 UQCRC1P31930 480 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 BTDP43251 543 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 KIR3DL2P43630 455 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 DNA2P51530 1060 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 GPR143P51810 404 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 VSX2P58304 361 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 GPNMBQ14956 572 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NDUFA9Q16795 377 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 RSPO4Q2I0M5 234 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 TCTN1Q2MV58 587 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TMEM44Q2T9K0 475 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NDUFAF6Q330K2 333 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 AGKQ53H12 422 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CCNJQ5T5M9 372 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 SEL1L3Q68CR1 1132 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 LYPD4Q6UWN0 246 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 GDPD4Q6W3E5 623 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CENPUQ71F23 418 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 NAGSQ8N159 534 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TMEM130Q8N3G9 435 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 GJC3Q8NFK1 279 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OR9G4Q8NGQ1 327 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OR10Z1Q8NGY1 313 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 OR2L8Q8NGY9 312 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 C9orf43Q8TAL5 461 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 MARCH1Q8TCQ1 289 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 GGHQ92820 318 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 PRMT6Q96LA8 375 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 PPP1R2P1Q96PQ5 205 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ACCSQ96QU6 501 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CBWD1Q9BRT8 395 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 HDAC8Q9BY41 377 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TKTL2Q9H0I9 626 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 KAT8Q9H7Z6 458 aaKnown RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 LMAN1LQ9HAT1 526 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CD209Q9NNX6 404 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 IL1RAPQ9NPH3 570 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ACSS1Q9NUB1 689 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 FLRT1Q9NZU1 646 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 CIDEBQ9UHD4 219 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 DUSP13Q9UII6 198 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 SH2B3Q9UQQ2 575 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 TSSC4Q9Y5U2 329 aaPredicted RBP2.86□□□□□ -1.95
CHD9-216ENST00000565803 COLEC10Q9Y6Z7 277 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
CHD9-216ENST00000565803 COL5A1P20908 1838 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 MBLAC1A4D2B0 266 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 EPOPA6NHQ4 379 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MBD3L5A6NJ08 208 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 DUXAA6NLW8 204 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 C1QTNF9BB2RNN3 333 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 F5H697 171 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 H0Y980 276 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms