RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CHRNGP07510 517 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 NEFHP12036 1026 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 BCKDHAP12694 445 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SDC1P18827 310 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ATP6V1C1P21283 382 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TBXA2RP21731 343 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PRPH2P23942 346 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 MAPK1P28482 360 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 HPCAL1P37235 193 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 RPL3P39023 403 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 CD79BP40259 229 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 KIR2DL2P43627 348 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 ASMTP46597 345 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 EIF1AXP47813 144 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 SERPINB4P48594 390 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PRIM2P49643 509 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZNF41P51814 821 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 CTBP2P56545 445 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 GANABQ14697 944 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 PCLAFQ15004 111 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PON3Q15166 354 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 DEFB113Q30KQ7 82 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 LSM12Q3MHD2 195 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 ATP6AP1LQ52LC2 224 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZNF385BQ569K4 471 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PDSS1Q5T2R2 415 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 CCNJQ5T5M9 372 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 CPTPQ5TA50 214 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 IL23RQ5VWK5 629 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 KANK2Q63ZY3 851 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 VWA1Q6PCB0 445 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZCCHC12Q6PEW1 402 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZNF474Q6S9Z5 364 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 APOOLQ6UXV4 268 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 WDR75Q8IWA0 830 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 RP1L1Q8IWN7 2480 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 COX18Q8N8Q8 333 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 BANPQ8N9N5 519 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SLC16A11Q8NCK7 471 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 FNDC9Q8TBE3 224 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TCP10LQ8TDR4 215 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ADAMTS15Q8TE58 950 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TWIST2Q8WVJ9 160 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 OSTF1Q92882 214 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 MTERF3Q96E29 417 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PIK3IP1Q96FE7 263 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 OTUB1Q96FW1 271 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZC3HAV1LQ96H79 300 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 SH3YL1Q96HL8 342 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 APOPT1Q96IL0 206 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PPP3R2Q96LZ3 170 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 COL12A1Q99715 3063 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 MED18Q9BUE0 208 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 MECRQ9BV79 373 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 CXXC4Q9H2H0 198 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 PLEKHF2Q9H8W4 249 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 HHATLQ9HCP6 504 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 UBQLN4Q9NRR5 601 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ACSS1Q9NUB1 689 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZCCHC3Q9NUD5 404 aaKnown RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 FBXO34Q9NWN3 711 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ELOVL5Q9NYP7 299 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SLC17A7Q9P2U7 560 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 FAF1Q9UNN5 650 aaPredicted RBP5.78□□□□□ -1.48
TCF4-228ENST00000565393 PROCRQ9UNN8 238 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 TMED5Q9Y3A6 229 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 HIVEP3Q5T1R4 2406 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 ZGRF1Q86YA3 2104 aa5.78□□□□□ -1.48
TCF4-228ENST00000565393 SPENQ96T58 3664 aaKnown RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 A0A087WZY1 265 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 WDR91A4D1P6 747 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ALG1L2C9J202 215 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 H3BNH8 94 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 HCRTR2O43614 444 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 CXCL13O43927 109 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 TBX19O60806 448 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 AQP8O94778 261 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 GOSR1O95249 250 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ATE1O95260 518 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PSMG1O95456 288 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 OXSR1O95747 527 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 NUDT14O95848 222 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 HRGP04196 525 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 HMGN2P05204 90 aaKnown RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 ACP2P11117 423 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 LAMP1P11279 417 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ME2P23368 584 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 UGT2B10P36537 528 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 CCT3P49368 545 aaKnown RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 RNF144AP50876 292 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 CARD18P57730 90 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 RAC1P63000 192 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 ADAM8P78325 824 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 POU6F2P78424 691 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 NKX6-1P78426 367 aaPredicted RBP5.77□□□□□ -1.49
TCF4-228ENST00000565393 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 FGFBP1Q14512 234 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 DUSP5Q16690 384 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 PGS1Q32NB8 556 aa5.77□□□□□ -1.49
TCF4-228ENST00000565393 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms