RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 LARP4Q71RC2 724 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR51T1Q8NGJ9 327 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR9I1Q8NGQ6 314 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CPNE7Q9UBL6 633 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 NID2Q14112 1375 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PRKACGP22612 351 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 IGFBP4P22692 258 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 IL4RP24394 825 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 GPR50Q13585 617 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 MRPL10Q7Z7H8 261 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 SIGLECL1Q8N7X8 197 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RAB7BQ96AH8 199 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RNF150Q9ULK6 438 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 N4BP2Q86UW6 1770 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 A6NLC8 198 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 STAG3L2P0CL84 134 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TRAPPC2P0DI81 140 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TRAPPC2BP0DI82 140 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PTBP1P26599 531 aaKnown RBP eCLIP4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLC1A3P43003 542 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 UBE2G2P60604 165 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SDHAF4Q5VUM1 108 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 DBX2Q6ZNG2 339 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 MRPL21Q7Z2W9 205 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLC35F3Q8IY50 421 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 GPR137CQ8N3F9 429 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RAB8BQ92930 207 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ZBTB8AQ96BR9 441 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PAPOLGQ9BWT3 736 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 VRTNQ9H8Y1 702 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PADI3Q9ULW8 664 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 MROH6A6NGR9 719 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 WNT10BO00744 389 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RAB5AP20339 215 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 BRCC3P46736 316 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 BEX3Q00994 111 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ACY1Q03154 408 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CDK5R2Q13319 367 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PAFAH1B3Q15102 231 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5H6Q8NGV6 325 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 KIAA1143Q96AT1 154 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 AKT1S1Q96B36 256 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 FAM46AQ96IP4 442 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 FEVQ99581 238 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ALG8Q9BVK2 526 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SMOC2Q9H3U7 446 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 BCAS3Q9H6U6 928 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PRTFDC1Q9NRG1 225 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PIGVQ9NUD9 493 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LAMA4Q16363 1823 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5H15A6NDH6 313 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5H14A6NHG9 310 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5H1A6NKK0 313 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLC31A1O15431 190 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 KCNQ2O43526 872 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ARSBP15848 533 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 KLRK1P26718 216 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLC6A8P48029 635 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TGM4P49221 684 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SUOXP51687 545 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 COTL1Q14019 142 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 NKPD1Q17RQ9 610 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LSMEM2Q8N112 164 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR4K15Q8NH41 348 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 RBFOX1Q9NWB1 397 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 LOC102723532A0A0G2JNH3 316 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5K4A6NMS3 321 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 TNFRSF10AO00220 468 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CLIC3O95833 236 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ADARB1P78563 741 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 POU4F3Q15319 338 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 MICAQ29983 383 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PHF19Q5T6S3 580 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 CYS1Q717R9 158 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SYT13Q7L8C5 426 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PRAP1Q96NZ9 151 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLC25A21Q9BQT8 299 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 HRH4Q9H3N8 390 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PLEKHJ1Q9NW61 149 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 COPS3Q9UNS2 423 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SPO11Q9Y5K1 396 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SCAMP1O15126 338 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SERPINA5P05154 406 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 GIFP27352 417 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PSMB3P49720 205 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 HEPHL1Q6MZM0 1159 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ADGRA1Q86SQ6 560 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 ZNF610Q8N9Z0 462 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 OR5L1Q8NGL2 311 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 C7orf43Q8WVR3 580 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PHYHIPQ92561 330 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 HINT2Q9BX68 163 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RNF208Q9H0X6 261 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 NIPAL2Q9H841 368 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLAMF7Q9NQ25 335 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 HAO2Q9NYQ3 351 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms