RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ARHGAP23Q9P227 1491 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 DHRS7CA6NNS2 312 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 E9PMD0 336 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 SGK494L7N484 410 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 PDXKO00764 312 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 NDUFA7O95182 113 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 VDAC1P21796 283 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 CAV2P51636 162 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 DPYSL3Q14195 570 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 OR5M10Q6IEU7 315 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 HSD17B13Q7Z5P4 300 aaPredicted RBP2.78□□□□□ -1.96
PALB2-203ENST00000565038 OR2T33Q8NG76 320 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 MGARPQ8TDB4 240 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 SLC13A3Q8WWT9 602 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 HAVCR1Q96D42 359 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 SDHCQ99643 169 aaPredicted RBP2.78□□□□□ -1.96
PALB2-203ENST00000565038 CNPY3Q9BT09 278 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 WRAP53Q9BUR4 548 aaKnown RBP2.78□□□□□ -1.96
PALB2-203ENST00000565038 TBC1D10AQ9BXI6 508 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 RBM28Q9NW13 759 aaKnown RBP2.78□□□□□ -1.96
PALB2-203ENST00000565038 C1orf123Q9NWV4 160 aa2.78□□□□□ -1.96
PALB2-203ENST00000565038 UTP6Q9NYH9 597 aaKnown RBP2.78□□□□□ -1.96
PALB2-203ENST00000565038 PRB2P02812 416 aaPredicted RBP2.77□□□□□ -1.97
PALB2-203ENST00000565038 ANXA4P09525 319 aaPredicted RBP2.77□□□□□ -1.97
PALB2-203ENST00000565038 CCDC192P0DO97 292 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 ADORA2BP29275 332 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 DHPSP49366 369 aaPredicted RBP2.77□□□□□ -1.97
PALB2-203ENST00000565038 NOVA1P51513 510 aaKnown RBP2.77□□□□□ -1.97
PALB2-203ENST00000565038 SLC26A5P58743 744 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 CCDC14Q49A88 953 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 SLC10A5Q5PT55 438 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 LDLRAP1Q5SW96 308 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 FAM120AOSQ5T036 256 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 CYS1Q717R9 158 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 LPCAT2Q7L5N7 544 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 IFNEQ86WN2 208 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 BBS1Q8NFJ9 593 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 OR9A4Q8NGU2 314 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 FCGR1BQ92637 280 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 MCHR2Q969V1 340 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 TMEM186Q96B77 213 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 NICN1Q9BSH3 213 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 TMEM121Q9BTD3 319 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 NFKBIZQ9BYH8 718 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 GPN2Q9H9Y4 310 aaPredicted RBP2.77□□□□□ -1.97
PALB2-203ENST00000565038 ANO10Q9NW15 660 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 IL19Q9UHD0 177 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 NEU3Q9UQ49 428 aa2.77□□□□□ -1.97
PALB2-203ENST00000565038 PINLYPA6NC86 204 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 TRIM64A6NGJ6 449 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 TRIM64BA6NI03 449 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 C19orf81C9J6K1 198 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 CCER2I3L3R5 266 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 K7ENP7 123 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 LGALS8O00214 317 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 TBL1XO60907 577 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 LYPLA1O75608 230 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 GPX5O75715 221 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 SEMG1P04279 462 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ALPPP05187 535 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 STSP08842 583 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 HOXC4P09017 264 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ALPPL2P10696 532 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 XRCC1P18887 633 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 STARP49675 285 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 UCNP55089 124 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 RND3P61587 244 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 RPL8P62917 257 aaKnown RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 VLDLRP98155 873 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 OTUD4Q01804 1114 aaKnown RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 ZNF45Q02386 682 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 GABPB1Q06547 395 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 WASHC5Q12768 1159 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ORC2Q13416 577 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 PDIA5Q14554 519 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ELAVL3Q14576 367 aaKnown RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 PDK1Q15118 436 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 VPS36Q86VN1 386 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 DQX1Q8TE96 717 aaKnown RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 TRUB1Q8WWH5 349 aaKnown RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 NEIL2Q969S2 332 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 NCLNQ969V3 563 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ATG10Q9H0Y0 220 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 RPAP3Q9H6T3 665 aaPredicted RBP2.76□□□□□ -1.97
PALB2-203ENST00000565038 CAB39LQ9H9S4 337 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 OR1A1Q9P1Q5 309 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 ONECUT1Q9UBC0 465 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 SPRR3Q9UBC9 169 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 GMPPBQ9Y5P6 360 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 MEGF6O75095 1541 aa2.76□□□□□ -1.97
PALB2-203ENST00000565038 SPAG9O60271 1321 aaKnown RBP2.75□□□□□ -1.97
PALB2-203ENST00000565038 RNF222A6NCQ9 220 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 TUBAL3A6NHL2 446 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 MMP23AO75900 390 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 CABYRO75952 493 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 MT-ATP6P00846 226 aa2.75□□□□□ -1.97
PALB2-203ENST00000565038 TIMP1P01033 207 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms