RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DEFB113Q30KQ7 82 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF551Q7Z340 670 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 MARCH3Q86UD3 253 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 MISPQ8IVT2 679 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 C10orf107Q8IVU9 208 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 GCNT2Q8N0V5 402 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 RIBC1Q8N443 379 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 METTL25Q8N6Q8 603 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 NUP43Q8NFH3 380 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 FAM110BQ8TC76 370 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 GPR151Q8TDV0 419 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ACTRT2Q8TDY3 377 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 GATA5Q9BWX5 397 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 RNF122Q9H9V4 155 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 NEUROD4Q9HD90 331 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 TNFRSF12AQ9NP84 129 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 BEX4Q9NWD9 120 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 GIN1Q9NXP7 522 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF226Q9NYT6 803 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 SH3BP4Q9P0V3 963 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 DNAJC15Q9Y5T4 150 aa10.99□□□□□ -0.65
GTF3C1-204ENST00000564664 C7orf72A4D263 438 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 ESPNB1AK53 854 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 MAPK1P28482 360 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 SERPINB5P36952 375 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 CD79BP40259 229 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 KIR2DL2P43627 348 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 PRIM2P49643 509 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 SUCLG1P53597 346 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 CLDN15P56746 228 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 HSPB3Q12988 150 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 PDE7AQ13946 482 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 RFTN2Q52LD8 501 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 KANK2Q63ZY3 851 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 CLEC6AQ6EIG7 209 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 WDR75Q8IWA0 830 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 UBQLNLQ8IYU4 475 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 CNEP1R1Q8N9A8 125 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 ZBTB8AQ96BR9 441 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 PGM2Q96G03 612 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF845Q96IR2 970 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 PPP3R2Q96LZ3 170 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 RTN4RQ9BZR6 473 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 FANCFQ9NPI8 374 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 UBQLN4Q9NRR5 601 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 GLRX2Q9NS18 164 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 TESMINQ9Y4I5 508 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 TRAF6Q9Y4K3 522 aa10.98□□□□□ -0.65
GTF3C1-204ENST00000564664 ACANP16112 2415 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 A0A1W2PQD3 144 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 GXYLT2A0PJZ3 443 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 C16orf97H3BN30 126 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 LSM1O15116 133 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 CTIFO43310 598 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 NDUFB5O43674 189 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■■■□□ 18.1
GTF3C1-204ENST00000564664 ALOX5P09917 674 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 LINC00032P0C843 101 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 HPGDP15428 266 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 SDC1P18827 310 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 IL11P20809 199 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PRKAG1P54619 331 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 ADAM8P78325 824 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 FAM27E3Q08E93 113 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 STX5Q13190 355 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PCLAFQ15004 111 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 SGCBQ16585 318 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 GRAMD1BQ3KR37 738 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 CPTPQ5TA50 214 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 GTF2IRD2BQ6EKJ0 949 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 BTLAQ7Z6A9 289 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 GTF2IRD2Q86UP8 949 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 C4orf33Q8N1A6 199 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 GTPBP8Q8N3Z3 284 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 BANPQ8N9N5 519 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 MS4A4EQ96PG1 132 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 STACQ99469 402 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PRPF18Q99633 342 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PIP5K1AQ99755 562 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PINK1Q9BXM7 581 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 ROPN1BQ9BZX4 212 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 HOXD1Q9GZZ0 328 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 TUBB1Q9H4B7 451 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 L2HGDHQ9H9P8 463 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 ROPN1Q9HAT0 212 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PLSCR4Q9NRQ2 329 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 FLRT3Q9NZU0 649 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 ATP6V1HQ9UI12 483 aa10.97□□□□□ -0.65
GTF3C1-204ENST00000564664 PCNX3Q9H6A9 2034 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 SMIM23A6NLE4 172 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 H3BML4 177 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 SEC14L5O43304 696 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 AKAP10O43572 662 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 LYPLA1O75608 230 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 KCNK2O95069 426 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 OXSR1O95747 527 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms