RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 OCIAD1Q9NX40 245 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 TAS2R9Q9NYW1 312 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 TAS2R7Q9NYW3 318 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 ADA2Q9NZK5 511 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 ZNF282Q9UDV7 671 aaPredicted RBP4.31□□□□□ -1.72
CDR2-203ENST00000563573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.31□□□□□ -1.72
CDR2-203ENST00000563573 PRPF19Q9UMS4 504 aaKnown RBP4.31□□□□□ -1.72
CDR2-203ENST00000563573 VPS4AQ9UN37 437 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 CORO2BQ9UQ03 480 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 MAN2B2Q9Y2E5 1009 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 ATG4BQ9Y4P1 393 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 CACNA1HO95180 2353 aa4.31□□□□□ -1.72
CDR2-203ENST00000563573 NUP214P35658 2090 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 CCDC88CQ9P219 2028 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CCDC187A0A096LP49 1063 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 TMEM247A6NEH6 219 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 DNAJC9-AS1A6NH13 148 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ZNF860A6NHJ4 632 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 GLOD5A6NK44 160 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 MYO1GB0I1T2 1018 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C4orf51C9J302 202 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C9JVG2 144 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 H3BMH7 237 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CLIC1O00299 241 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CASC3O15234 703 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 EMC8O43402 210 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 B4GALT2O60909 372 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 RDH16O75452 317 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 BCAS2O75934 225 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 SOX30O94993 753 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 KRT75O95678 551 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 IL33O95760 270 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 AIFM1O95831 613 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 FHP07954 510 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ABCB1P08183 1280 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 FTH1P19P0C7X4 201 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ZCCHC18P0CG32 403 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 NQO1P15559 274 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 ITGAXP20702 1163 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 UQCRC2P22695 453 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ME2P23368 584 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 GATA3P23771 443 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CHI3L1P36222 383 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 FEN1P39748 380 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 OR1D4P47884 311 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ZFP36L2P47974 494 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 NCBP2P52298 156 aaKnown RBP eCLIP4.3□□□□□ -1.72
CDR2-203ENST00000563573 HSD17B7P56937 341 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 NCALDP61601 193 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 OLR1P78380 273 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 TARDBPQ13148 414 aaKnown RBP eCLIP4.3□□□□□ -1.726e-10■■■■■ 35.1
CDR2-203ENST00000563573 PDE7AQ13946 482 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 SERTAD2Q14140 314 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C16orf72Q14CZ0 275 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ISXQ2M1V0 245 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 RUNDC3AQ59EK9 446 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 SAMD4BQ5PRF9 694 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ARHGAP40Q5TG30 622 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 HES3Q5TGS1 186 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C1orf189Q5VU69 101 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 MLIPQ5VWP3 458 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C18orf63Q68DL7 685 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ANKRD26P1Q6NSI1 321 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 NANOGP8Q6NSW7 305 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PWWP2BQ6NUJ5 590 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 SLC2A7Q6PXP3 512 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 DHRS13Q6UX07 377 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ASRGL1Q7L266 308 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PRSS41Q7RTY9 318 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 DGLUCYQ7Z3D6 616 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 TMPRSS12Q86WS5 348 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 LRRC25Q8N386 305 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 FBXW8Q8N3Y1 598 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PRR18Q8N4B5 295 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 METTL27Q8N6F8 245 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 OR5T3Q8NGG3 340 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 GOT1L1Q8NHS2 421 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 WDR36Q8NI36 951 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 METTL21AQ8WXB1 218 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 C10orf90Q96M02 699 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CCDC115Q96NT0 180 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 ANKRD27Q96NW4 1050 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 OR1F2PQ96R84 312 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CGREF1Q99674 301 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 CTRCQ99895 268 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PELOQ9BRX2 385 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 PAIP1Q9H074 479 aaKnown RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 LRMDAQ9H2I8 198 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 NANOGQ9H9S0 305 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 SPAG4Q9NPE6 437 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 SLC52A3Q9NQ40 469 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 PRTFDC1Q9NRG1 225 aa4.3□□□□□ -1.72
CDR2-203ENST00000563573 TEX10Q9NXF1 929 aaPredicted RBP4.3□□□□□ -1.72
CDR2-203ENST00000563573 HCN3Q9P1Z3 774 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms