RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CCDC151A5D8V7 595 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TTC36A6NLP5 189 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TRIM49D1C9J1S8 452 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 ANGPTL1O95841 491 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 JUNP05412 331 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 ENO1P06733 434 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 IFI6P09912 130 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TAC1P20366 129 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 EIF1AXP47813 144 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 SLC6A8P48029 635 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 HTR6P50406 440 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 ZNF763Q0D2J5 394 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TNK1Q13470 666 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 ETFDHQ16134 617 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 ADGRG7Q96K78 797 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TMEM237Q96Q45 408 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 EBPLQ9BY08 206 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 ACTR6Q9GZN1 396 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 TSPYL1Q9H0U9 437 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 CDC42EP4Q9H3Q1 356 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 C3orf14Q9HBI5 128 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 DDX18Q9NVP1 670 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 MCTS1Q9ULC4 181 aaKnown RBP16.72■□□□□ 0.27
NME3-204ENST00000563498 GPR52Q9Y2T5 361 aa16.72■□□□□ 0.27
NME3-204ENST00000563498 A0A087WZY1 265 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 EIF1AYO14602 144 aaKnown RBP16.71■□□□□ 0.27
NME3-204ENST00000563498 PLAUP00749 431 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 IMPDH1P20839 514 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 CASQ1P31415 396 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 PKNOX1P55347 436 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 LCP2Q13094 533 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 PRSS53Q2L4Q9 553 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 TEX35Q5T0J7 233 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 LGSNQ5TDP6 509 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 HEPHL1Q6MZM0 1159 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 ADAM5Q6NVV9 412 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 STK32CQ86UX6 486 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 WDR75Q8IWA0 830 aaKnown RBP16.71■□□□□ 0.27
NME3-204ENST00000563498 OR10D3Q8NH80 312 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.71■□□□□ 0.27
NME3-204ENST00000563498 DCAKDQ8WVC6 231 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 ELP4Q96EB1 424 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 MIEF1Q9NQG6 463 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 WBP11Q9Y2W2 641 aaKnown RBP16.71■□□□□ 0.27
NME3-204ENST00000563498 RTTNQ86VV8 2226 aa16.71■□□□□ 0.27
NME3-204ENST00000563498 STAB1Q9NY15 2570 aa16.71■□□□□ 0.26
NME3-204ENST00000563498 PCNX3Q9H6A9 2034 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 C7orf72A4D263 438 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 ADAMDEC1O15204 470 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 UTS2O95399 124 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 PSMB1P20618 241 aaKnown RBP16.7■□□□□ 0.26
NME3-204ENST00000563498 NTSP30990 170 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 RPS4XP62701 263 aaKnown RBP16.7■□□□□ 0.26
NME3-204ENST00000563498 DMTNQ08495 405 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 C2orf80Q0P641 193 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 CTU2Q2VPK5 515 aaKnown RBP16.7■□□□□ 0.26
NME3-204ENST00000563498 FAM71E1Q6IPT2 247 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 PPP4R4Q6NUP7 873 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 APOOLQ6UXV4 268 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 LCA5Q86VQ0 697 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 WFDC8Q8IUA0 241 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 GTPBP8Q8N3Z3 284 aaPredicted RBP16.7■□□□□ 0.26
NME3-204ENST00000563498 AKAP1Q92667 903 aaKnown RBP eCLIP16.7■□□□□ 0.26
NME3-204ENST00000563498 AMDHD1Q96NU7 426 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 CLEC4AQ9UMR7 237 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 USF3Q68DE3 2245 aa16.7■□□□□ 0.26
NME3-204ENST00000563498 CHD3Q12873 2000 aaKnown RBP16.7■□□□□ 0.26
NME3-204ENST00000563498 MXRA5Q9NR99 2828 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 SHISA8B8ZZ34 492 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 POC1B-GALNT4F8VUJ3 575 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 OVOL3O00110 214 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 DLX3O60479 287 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 KCNH1O95259 989 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 SNRPAP09012 282 aaKnown RBP16.69■□□□□ 0.26
NME3-204ENST00000563498 RFX3P48380 749 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 CLEC12BQ2HXU8 276 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 ESPNLQ6ZVH7 1005 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 EXOC3L1Q86VI1 746 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 SLC22A9Q8IVM8 553 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 ZBTB8AQ96BR9 441 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 L3HYPDHQ96EM0 354 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 MYNNQ9NPC7 610 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 TMEM216Q9P0N5 145 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 LAMP3Q9UQV4 416 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 VDAC3Q9Y277 283 aa16.69■□□□□ 0.26
NME3-204ENST00000563498 ALG1L2C9J202 215 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 SYNGR4O95473 234 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 TUBBP07437 444 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 NGFRP08138 427 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 NID1P14543 1247 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 ATP5F1P24539 256 aaPredicted RBP16.68■□□□□ 0.26
NME3-204ENST00000563498 PSMA4P25789 261 aaKnown RBP16.68■□□□□ 0.26
NME3-204ENST00000563498 GABRA3P34903 492 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 PRKAA2P54646 552 aa16.68■□□□□ 0.26
NME3-204ENST00000563498 ETF1P62495 437 aaKnown RBP16.68■□□□□ 0.26
NME3-204ENST00000563498 RAC1P63000 192 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms