RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 KLHL26Q53HC5 615 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDH1-204ENST00000562118 CCNJQ5T5M9 372 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 FAM91A1Q658Y4 838 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 FIGNL1Q6PIW4 674 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 DNAJC14Q6Y2X3 702 aaPredicted RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 FRRS1Q6ZNA5 592 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 FGD2Q7Z6J4 655 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 PACS2Q86VP3 889 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 JADE3Q92613 823 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 AURKBQ96GD4 344 aaPredicted RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 TRNT1Q96Q11 434 aaKnown RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 HOXD1Q9GZZ0 328 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 IKZF5Q9H5V7 419 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 HHATLQ9HCP6 504 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 THUMPD1Q9NXG2 353 aaKnown RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 KCNE5Q9UJ90 142 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 LIPT1Q9Y234 373 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 NDUFAF1Q9Y375 327 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 ACOT7O00154 380 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 CLIC1O00299 241 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 HS6ST1O60243 411 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 SUSD5O60279 629 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 DNAJA2O60884 412 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 FAM107AO95990 144 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 TFPTP0C1Z6 253 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 OR12D1P0DN82 309 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 PPIBP23284 216 aaKnown RBP12.24□□□□□ -0.45
CDH1-204ENST00000562118 CHI3L1P36222 383 aaPredicted RBP12.24□□□□□ -0.45
CDH1-204ENST00000562118 MAGEA5P43359 124 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 PPIAP62937 165 aaKnown RBP12.24□□□□□ -0.45
CDH1-204ENST00000562118 RGNQ15493 299 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 MAPRE2Q15555 327 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 IGFBP7Q16270 282 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 RUNDC3AQ59EK9 446 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 NHSL2Q5HYW2 709 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 C6orf10Q5SRN2 563 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 TYW3Q6IPR3 259 aaKnown RBP12.24□□□□□ -0.45
CDH1-204ENST00000562118 TNFAIP8L2Q6P589 184 aaPredicted RBP12.24□□□□□ -0.45
CDH1-204ENST00000562118 TREML1Q86YW5 311 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 MISPQ8IVT2 679 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 C10orf111Q8N326 155 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 FAM71CQ8NEG0 241 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 OR2B2Q9GZK3 357 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 SLC38A1Q9H2H9 487 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 RAD21L1Q9H4I0 556 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 EXD2Q9NVH0 621 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 KLRF1Q9NZS2 232 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 ADAM21Q9UKJ8 722 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 CAPN7Q9Y6W3 813 aa12.24□□□□□ -0.45
CDH1-204ENST00000562118 ESPL1Q14674 2120 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 HEATR5AQ86XA9 2040 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 J3QKU1 62 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 TFECO14948 347 aaPredicted RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 FCMRO60667 390 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 HCN1O60741 890 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 STX11O75558 287 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 UGT2B17O75795 530 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 CBR3O75828 277 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 CHRM4P08173 479 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 STSP08842 583 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 ETFAP13804 333 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 ENDOUP21128 410 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 DCTP40126 519 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 RFC3P40938 356 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 ANXA11P50995 505 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 ATP12AP54707 1039 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 PLAURQ03405 335 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 TMEM44Q2T9K0 475 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 TRMT5Q32P41 509 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 PRAMEF8Q5VWM4 474 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 PRAMEF7Q5VXH5 474 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 C8orf82Q6P1X6 216 aaPredicted RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 LRRC74BQ6ZQY2 392 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 TRILQ7L0X0 811 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 NET1Q7Z628 596 aaPredicted RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 MTERF4Q7Z6M4 381 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 DHDDSQ86SQ9 333 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 MTDHQ86UE4 582 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 PLCZ1Q86YW0 608 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 GHDCQ8N2G8 530 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 OR2M3Q8NG83 312 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 OR1J4Q8NGS1 313 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 RP9Q8TA86 221 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 RAB8BQ92930 207 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 ROPN1LQ96C74 230 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 ANKRD27Q96NW4 1050 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 CCT8L2Q96SF2 557 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 CGREF1Q99674 301 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 RUBCNLQ9H714 662 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
CDH1-204ENST00000562118 SUCOQ9UBS9 1254 aaKnown RBP12.23□□□□□ -0.45
CDH1-204ENST00000562118 NCOA6Q14686 2063 aaPredicted RBP12.22□□□□□ -0.45
CDH1-204ENST00000562118 CENPVL1A0A0U1RR11 272 aa12.22□□□□□ -0.45
CDH1-204ENST00000562118 OR14I1A6ND48 311 aa12.22□□□□□ -0.45
CDH1-204ENST00000562118 ANKUB1A6NFN9 424 aa12.22□□□□□ -0.45
CDH1-204ENST00000562118 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
CDH1-204ENST00000562118 FAM166BA8MTA8 275 aa12.22□□□□□ -0.45
CDH1-204ENST00000562118 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
CDH1-204ENST00000562118 AQP7O14520 342 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms