RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CADM4Q8NFZ8 388 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 OPALINQ96PE5 141 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 SLC38A2Q96QD8 506 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 MND1Q9BWT6 205 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 PRRG3Q9BZD7 231 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 HCN3Q9P1Z3 774 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 CLEC2DQ9UHP7 191 aa9.12□□□□□ -0.95
SMG1-205ENST00000561947 DIMT1Q9UNQ2 313 aaKnown RBP9.12□□□□□ -0.95
SMG1-205ENST00000561947 TP53BP1Q12888 1972 aaPredicted RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 BLACEA4D250 179 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 TRAPPC13A5PLN9 417 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CDHR4A6H8M9 788 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 METTL15A6NJ78 407 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ARHGAP33O14559 1287 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 SCG5P05408 212 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CKMT1AP12532 417 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 PRG2P13727 222 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 GNSP15586 552 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ZNF12P17014 697 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 HTR2AP28223 471 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 GABRA4P48169 554 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 SSX1Q16384 188 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 TIMM50Q3ZCQ8 353 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 NIPAL1Q6NVV3 410 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ATCAYQ86WG3 371 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 C17orf82Q86X59 251 aaPredicted RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 MFSD4AQ8N468 514 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 NANOGP1Q8N7R0 232 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 OR52I1Q8NGK6 324 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 MCFD2Q8NI22 146 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ADAMTS18Q8TE60 1221 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 OSTF1Q92882 214 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ZNF285Q96NJ3 590 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 DACH2Q96NX9 599 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 PRSS27Q9BQR3 290 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CHCHD6Q9BRQ6 235 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 LMF2Q9BU23 707 aaKnown RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 FOXQ1Q9C009 403 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 KRCC1Q9NPI7 259 aaPredicted RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 TESQ9UGI8 421 aaKnown RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 MRPS33Q9Y291 106 aaKnown RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 KNL1Q8NG31 2342 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CACNA1IQ9P0X4 2223 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 TGFBR3LH3BV60 316 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 PRODHO43272 600 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 FMO6PO60774 539 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 SOX30O94993 753 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 RAB36O95755 333 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 GKN3PP0CG01 181 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 BMP4P12644 408 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 S1PR1P21453 382 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMG1-205ENST00000561947 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 SPHARQ15513 63 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 LRIT3Q3SXY7 679 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 SOWAHCQ53LP3 525 aaPredicted RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 ZNF620Q6ZNG0 422 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 ZNF595Q8IYB9 648 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CLDN22Q8N7P3 220 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 OR6C4Q8NGE1 309 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 PEX11GQ96HA9 241 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CENPOQ9BU64 300 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 MIR1-1HGQ9H1L0 117 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 FOLH1BQ9HBA9 442 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 HHATLQ9HCP6 504 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 MRPS18AQ9NVS2 196 aaKnown RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 IL20Q9NYY1 176 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 NLGN3Q9NZ94 848 aa9.11□□□□□ -0.95
SMG1-205ENST00000561947 CCDC59Q9P031 241 aaKnown RBP9.11□□□□□ -0.95
SMG1-205ENST00000561947 IRGMA1A4Y4 181 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 HYKKA2RU49 373 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 SNTNA6NMZ2 147 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 KDM4EB2RXH2 506 aaPredicted RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 AQP9O43315 295 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 HRO43593 1189 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 CTNSO60931 367 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 KCNK2O95069 426 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 NSA2O95478 260 aaKnown RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 MLLT3P42568 568 aaPredicted RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 GAS1P54826 345 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 IGLV3-21P80748 117 aaPredicted RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 MAT1AQ00266 395 aaKnown RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 STX4Q12846 297 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 FAM53BQ14153 422 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 OR1Q1Q15612 314 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 ZNF404Q494X3 552 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 KLHL22Q53GT1 634 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 CLEC12AQ5QGZ9 265 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 COL13A1Q5TAT6 717 aaPredicted RBP9.1□□□□□ -0.95
SMG1-205ENST00000561947 BTLAQ7Z6A9 289 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 CYP4Z2PQ8N1L4 340 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 OR4Q3Q8NH05 313 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 B4GALNT2Q8NHY0 566 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 MMP27Q9H306 513 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 RNF167Q9H6Y7 350 aa9.1□□□□□ -0.95
SMG1-205ENST00000561947 PRTFDC1Q9NRG1 225 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms