RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PWWP2BQ6NUJ5 590 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 DHRS4L2Q6PKH6 230 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 COX15Q7KZN9 410 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 B3GNT8Q7Z7M8 397 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 VASH2Q86V25 355 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 CARM1Q86X55 608 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 CHERPQ8IWX8 916 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 HS3ST5Q8IZT8 346 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 COX18Q8N8Q8 333 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 C7orf57Q8NEG2 295 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 OR4C15Q8NGM1 316 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 MAGEE2Q8TD90 523 aaPredicted RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 TFAP2CQ92754 450 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 TSLPQ969D9 159 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 NRBF2Q96F24 287 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 RBM18Q96H35 190 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 VSTM2LQ96N03 204 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 PTCHD1Q96NR3 888 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 RDH12Q96NR8 316 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 BARD1Q99728 777 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 PIP5K1AQ99755 562 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 RBM4BQ9BQ04 359 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 LMF2Q9BU23 707 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 ADI1Q9BV57 179 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 RBM4Q9BWF3 364 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 YIPF2Q9BWQ6 316 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 OSBPL10Q9BXB5 764 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 ANKRD60Q9BZ19 345 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 SLC7A5P2Q9GIP4 190 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 TGIF2Q9GZN2 237 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 ADNPQ9H2P0 1102 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 REEP1Q9H902 201 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 FOLH1BQ9HBA9 442 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 POLE3Q9NRF9 147 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 SLC22A11Q9NSA0 550 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 CTSFQ9UBX1 484 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 KCND3Q9UK17 655 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 ERVK-19Q9WJR5 959 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 SH3GLB1Q9Y371 365 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 SAMHD1Q9Y3Z3 626 aaKnown RBP6.97□□□□□ -1.29
TPM1-231ENST00000561395 SHANK1Q9Y566 2161 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 LYVE1Q9Y5Y7 322 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 ENPP4Q9Y6X5 453 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 U3KQV3 271 aa6.97□□□□□ -1.29
TPM1-231ENST00000561395 F8P00451 2351 aa6.96□□□□□ -1.29
TPM1-231ENST00000561395 IGLV3-12A0A075B6K2 115 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 TCRBV16S1A1N1A0A5B0 115 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 GXYLT2A0PJZ3 443 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 EFCAB7A8K855 629 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 J3KTA2 159 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 TNFRSF11BO00300 401 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 FCMRO60667 390 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 STX11O75558 287 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 SNAP29O95721 258 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 EPPINO95925 133 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 ONECUT2O95948 504 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 LGI1O95970 557 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 IFNA16P05015 189 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 GUSBP08236 651 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 HBQ1P09105 142 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 FGF5P12034 268 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 WT1P19544 449 aaPredicted RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 RPS4Y1P22090 263 aaKnown RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 CD82P27701 267 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 PRKAR1BP31321 381 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 CSTF2P33240 577 aaKnown RBP eCLIP6.96□□□□□ -1.3
TPM1-231ENST00000561395 RORAP35398 523 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 CAPGP40121 348 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 LIMS1P48059 325 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 PGDP52209 483 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 CDH12P55289 794 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 POU6F2P78424 691 aaPredicted RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 SPIBQ01892 262 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 MERTKQ12866 999 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 KCNAB2Q13303 367 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 IL11RAQ14626 422 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 ZNHIT3Q15649 155 aaPredicted RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 ELAVL1Q15717 326 aaKnown RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 SLC36A3Q495N2 470 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 MINDY4Q4G0A6 757 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 NKAIN1Q4KMZ8 207 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 VWA2Q5GFL6 755 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 ZNF311Q5JNZ3 666 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 ZNF385CQ66K41 422 aaPredicted RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 ANKRD34AQ69YU3 496 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 DESI1Q6ICB0 168 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 TYW3Q6IPR3 259 aaKnown RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 UGT2A3Q6UWM9 527 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 BPHLQ86WA6 291 aaPredicted RBP6.96□□□□□ -1.3
TPM1-231ENST00000561395 ATCAYQ86WG3 371 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 PPP1R3BQ86XI6 285 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 VRK2Q86Y07 508 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 LACC1Q8IV20 430 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 ZNF615Q8N8J6 731 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 BMPERQ8N8U9 685 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 SLC38A9Q8NBW4 561 aa6.96□□□□□ -1.3
TPM1-231ENST00000561395 AGBL5Q8NDL9 886 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms