RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CFL2Q9Y281 166 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 MRPS14O60783 128 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 THY1P04216 161 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 HTR1AP08908 422 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 GABRB1P18505 474 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 DRD5P21918 477 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 MMP11P24347 488 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 EEF1B2P24534 225 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 IFNGR2P38484 337 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PSMD4P55036 377 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 PLAURQ03405 335 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 TARDBPQ13148 414 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNX1-211ENST00000560829 ANGPT1Q15389 498 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 DECR1Q16698 335 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ZC3H14Q6PJT7 736 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 BPHLQ86WA6 291 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 BPIFB6Q8NFQ5 453 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 FAM81AQ8TBF8 368 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ACOT11Q8WXI4 607 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 SLC41A3Q96GZ6 507 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 GFM1Q96RP9 751 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 GTPBP2Q9BX10 602 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 PAK1IP1Q9NWT1 392 aaPredicted RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 TESQ9UGI8 421 aaKnown RBP11.95□□□□□ -0.5
SNX1-211ENST00000560829 CBLCQ9ULV8 474 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PCDHGB1Q9Y5G3 927 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 PCDHGA5Q9Y5G8 931 aa11.95□□□□□ -0.5
SNX1-211ENST00000560829 ADAMTS20P59510 1910 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 NPIPA5A0A0B4J1W7 369 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 NPIPA7E9PJI5 369 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 DDAH2O95865 285 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 TP53P04637 393 aaPredicted RBP11.94□□□□□ -0.5
SNX1-211ENST00000560829 NPIPA8P0DM63 369 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 GSTM3P21266 225 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 AVPR2P30518 371 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 TTKP33981 857 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 MPLP40238 635 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 PPICP45877 212 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 SLC35A2P78381 396 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 HOXC5Q00444 222 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 FOXD4Q12950 439 aaPredicted RBP11.94□□□□□ -0.5
SNX1-211ENST00000560829 TRA2AQ13595 282 aaKnown RBP eCLIP11.94□□□□□ -0.53e-6■■□□□ 12.9
SNX1-211ENST00000560829 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 RBM44Q6ZP01 1051 aaKnown RBP11.94□□□□□ -0.5
SNX1-211ENST00000560829 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 GDF7Q7Z4P5 450 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 SPARTQ8N0X7 666 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 OR14A16Q8NHC5 309 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 ZNF721Q8TF20 911 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 UBE2FQ969M7 185 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 ART5Q96L15 291 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 TUBA1CQ9BQE3 449 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 VN1R1Q9GZP7 353 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 PNO1Q9NRX1 252 aaKnown RBP11.94□□□□□ -0.5
SNX1-211ENST00000560829 PLCXD1Q9NUJ7 323 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 SCN3BQ9NY72 215 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 ZNF226Q9NYT6 803 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 CEPT1Q9Y6K0 416 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 DMDP11532 3685 aa11.94□□□□□ -0.5
SNX1-211ENST00000560829 D6RAR5 112 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 POLR1CO15160 346 aaPredicted RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 XPNPEP2O43895 674 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 MPZL2O60487 215 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SCRG1O75711 98 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 HBQ1P09105 142 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 FMO3P31513 532 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 KRT20P35900 424 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 ATP12AP54707 1039 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CDC42P60953 191 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX1-211ENST00000560829 ZBED5Q49AG3 693 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 MFSD4BQ5TF39 518 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 ZNF385CQ66K41 422 aaPredicted RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 PWWP2BQ6NUJ5 590 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CMIPQ8IY22 773 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 BCORP1Q8N888 145 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SLC38A9Q8NBW4 561 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SGCDQ92629 289 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 DAZLQ92904 295 aaKnown RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 TMIGD2Q96BF3 282 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NODALQ96S42 347 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SLC7A5P2Q9GIP4 190 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CXorf56Q9H5V9 222 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SYNDIG1Q9H7V2 258 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 POLR1BQ9H9Y6 1135 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 VCX3AQ9NNX9 186 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 RASSF1Q9NS23 344 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 C14orf105Q9NVL8 296 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CTSFQ9UBX1 484 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SDK1Q7Z5N4 2213 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CABIN1Q9Y6J0 2220 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 TIAF1O95411 115 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GP1BAP07359 652 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms