RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZIC3O60481 467 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 TUBBP07437 444 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 BCKDHAP12694 445 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 PRPS1L1P21108 318 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ATP6V1C1P21283 382 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ME2P23368 584 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ALDH3A1P30838 453 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 FRKP42685 505 aaPredicted RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 PRKAG1P54619 331 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 WNT3P56703 355 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 TESK1Q15569 626 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 PDSS1Q5T2R2 415 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 POMZP3Q6PJE2 187 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 Q6ZSR9 355 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ZNF551Q7Z340 670 aaPredicted RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 OR56A1Q8NGH5 318 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 DUSP19Q8WTR2 217 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 SLC9A6Q92581 669 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 JADE3Q92613 823 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 CAVIN3Q969G5 261 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ZBTB8AQ96BR9 441 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 INTS12Q96CB8 462 aaKnown RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 STACQ99469 402 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 HOXD1Q9GZZ0 328 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 C12orf65Q9H3J6 166 aaKnown RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 UBQLN4Q9NRR5 601 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 DUSP22Q9NRW4 184 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 GIN1Q9NXP7 522 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 ST6GALNAC2Q9UJ37 374 aa12.74□□□□□ -0.37
TPM1-223ENST00000560445 EIF3LQ9Y262 564 aaKnown RBP12.74□□□□□ -0.37
TPM1-223ENST00000560445 FAM221AA4D161 298 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ALG1L2C9J202 215 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 PIP5K1BO14986 540 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 SCAMP2O15127 329 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 ZNF500O60304 480 aaPredicted RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 EIF1P41567 113 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 STARP49675 285 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 PPP2R2AP63151 447 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 TP53BP2Q13625 1128 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 SGCBQ16585 318 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 SMU1Q2TAY7 513 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 SPDYE7PQ495Y7 208 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 RFTN2Q52LD8 501 aaPredicted RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 CPTPQ5TA50 214 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 MFSD12Q6NUT3 480 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 WDR75Q8IWA0 830 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 UBQLNLQ8IYU4 475 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 FNDC5Q8NAU1 212 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 TCP10LQ8TDR4 215 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ACTRT2Q8TDY3 377 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 AENQ8WTP8 325 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 SMPDL3BQ92485 455 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 CIDECQ96AQ7 238 aaPredicted RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 ARL8AQ96BM9 186 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 CHMP6Q96FZ7 201 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 EGLN2Q96KS0 407 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 TMEM109Q9BVC6 243 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 BTBD2Q9BX70 525 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 TNFRSF12AQ9NP84 129 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ZCCHC3Q9NUD5 404 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 GALNT8Q9NY28 637 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ZNF226Q9NYT6 803 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 MED11Q9P086 117 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 FAF1Q9UNN5 650 aaPredicted RBP12.73□□□□□ -0.37
TPM1-223ENST00000560445 CSMD2Q7Z408 3487 aa12.73□□□□□ -0.37
TPM1-223ENST00000560445 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 A0A1W2PRB8 838 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 OR2M5A3KFT3 312 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 C7orf72A4D263 438 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 SH3D21A4FU49 640 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 GJE1A6NN92 205 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 A8MXE2 369 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 SEC14L5O43304 696 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.371e-8■■□□□ 11.9
TPM1-223ENST00000560445 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 TBXA2RP21731 343 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 CPOXP36551 454 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 B3GALT5-AS1P59052 145 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 XKR7Q5GH72 579 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 FAM219BQ5XKK7 198 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 ANKRD26P1Q6NSI1 321 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 MTERF4Q7Z6M4 381 aaKnown RBP12.72□□□□□ -0.37
TPM1-223ENST00000560445 LUZP2Q86TE4 346 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 CNEP1R1Q8N9A8 125 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 OR5P2Q8WZ92 322 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 TUBGCP3Q96CW5 907 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 ALPK1Q96QP1 1244 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 PRRG4Q9BZD6 226 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 TUBB1Q9H4B7 451 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 GLRX2Q9NS18 164 aa12.72□□□□□ -0.37
TPM1-223ENST00000560445 EMC9Q9Y3B6 208 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms