RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 HPS6Q86YV9 775 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SLC30A8Q8IWU4 369 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 MICU2Q8IYU8 434 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 HIPK4Q8NE63 616 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 OR4C3Q8NH37 302 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 SPPL2AQ8TCT8 520 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 HGDQ93099 445 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 NODALQ96S42 347 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TREX2Q9BQ50 279 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-204ENST00000559931 THTPAQ9BU02 230 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TBL1XR1Q9BZK7 514 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF350Q9GZX5 532 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ALG2Q9H553 416 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TRIM45Q9H8W5 580 aaPredicted RBP13.17□□□□□ -0.3
SMAD6-204ENST00000559931 FLRT3Q9NZU0 649 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ABCD2Q9UBJ2 740 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF232Q9UNY5 417 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 USP22Q9UPT9 525 aa13.17□□□□□ -0.3
SMAD6-204ENST00000559931 TRAV17A0A0B4J275 112 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 ERVH48-1M5A8F1 160 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SCO2O43819 266 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 DNAJA2O60884 412 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 NEURL1O76050 574 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 PGM3O95394 542 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 CCL3P10147 92 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 TBXA2RP21731 343 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 PCGF2P35227 344 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 DCTP40126 519 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 GZMMP51124 257 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 ATP12AP54707 1039 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 KCNJ2P63252 427 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF766Q5HY98 468 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 FRRS1Q6ZNA5 592 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 HMGN2P46Q86SG4 172 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 PEX5LQ8IYB4 626 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 EXD3Q8N9H8 876 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 MDS2Q8NDY4 140 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SLC26A7Q8TE54 656 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 PAQR8Q8TEZ7 354 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SLC7A6OSQ96CW6 309 aaPredicted RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 JSRP1Q96MG2 331 aaPredicted RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF607Q96SK3 696 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SLC38A1Q9H2H9 487 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 CSAG2Q9Y5P2 127 aa13.16□□□□□ -0.3
SMAD6-204ENST00000559931 CHCHD2Q9Y6H1 151 aaPredicted RBP13.16□□□□□ -0.3
SMAD6-204ENST00000559931 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 H3BNH8 94 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 KLRC4-KLRK1H3BQV0 150 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 GTPBP1O00178 669 aaKnown RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 SERPINB7O75635 380 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 DNAJC8O75937 253 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PDE9AO76083 593 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 OXSR1O95747 527 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 IL7RP16871 459 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 CNR1P21554 472 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 EVI2BP34910 448 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 MSX2P35548 267 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PGM1P36871 562 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 CASP3P42574 277 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 CD97P48960 835 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 GPR85P60893 370 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 LY6DQ14210 128 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 MAPK11Q15759 364 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PDZK1Q5T2W1 519 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PRAMEF8Q5VWM4 474 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PRAMEF7Q5VXH5 474 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 SLC30A6Q6NXT4 461 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 ZNF227Q86WZ6 799 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 FBXW8Q8N3Y1 598 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 FAM156AQ8NDB6 213 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 GRHL3Q8TE85 626 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 FIG4Q92562 907 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 PMM1Q92871 262 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 UBL7Q96S82 380 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-204ENST00000559931 DOHHQ9BU89 302 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 HES7Q9BYE0 225 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 SAP130Q9H0E3 1048 aa13.15□□□□□ -0.3
SMAD6-204ENST00000559931 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms