RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 COPEO14579 308 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 AZIN1O14977 448 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 OIP5O43482 229 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CRCPO75575 148 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 SMNDC1O75940 238 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPS18-203ENST00000558855 NKX2-2O95096 273 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 OXSR1O95747 527 aaPredicted RBP12.19□□□□□ -0.46
VPS18-203ENST00000558855 ANGPTL1O95841 491 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 OPN1LWP04000 364 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 RAF1P04049 648 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 HOXB4P17483 251 aaPredicted RBP12.19□□□□□ -0.46
VPS18-203ENST00000558855 IL11P20809 199 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 LOXP28300 417 aaPredicted RBP12.19□□□□□ -0.46
VPS18-203ENST00000558855 GCKP35557 465 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 PEX19P40855 299 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CPA2P48052 419 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 DUSP5Q16690 384 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 DECR1Q16698 335 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 DEFB113Q30KQ7 82 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CFAP157Q5JU67 520 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CCNJQ5T5M9 372 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 FIGNL1Q6PIW4 674 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 IKBIPQ70UQ0 350 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 ZNF550Q7Z398 422 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CXorf67Q86X51 503 aaPredicted RBP12.19□□□□□ -0.46
VPS18-203ENST00000558855 CNEP1R1Q8N9A8 125 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 POC1BQ8TC44 478 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 MARK4Q96L34 752 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 C3orf30Q96M34 536 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 WFIKKN1Q96NZ8 548 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 ALPK1Q96QP1 1244 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 CCT7Q99832 543 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 Q9N2J8 555 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
VPS18-203ENST00000558855 KLHL28Q9NXS3 571 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 ABCG2Q9UNQ0 655 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 VDAC3Q9Y277 283 aa12.19□□□□□ -0.46
VPS18-203ENST00000558855 FREM1Q5H8C1 2179 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 NPIPA5A0A0B4J1W7 369 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 NPIPA7E9PJI5 369 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 TBX19O60806 448 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 SPAG7O75391 227 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 NPIPA8P0DM63 369 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 BCKDHAP12694 445 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PEPDP12955 493 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 SHC1P29353 583 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PRKAG1P54619 331 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PRR5P85299 388 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PON3Q15166 354 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 CD226Q15762 336 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 CTU2Q2VPK5 515 aaKnown RBP12.18□□□□□ -0.46
VPS18-203ENST00000558855 GALNTL6Q49A17 601 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 MFSD12Q6NUT3 480 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 BANPQ8N9N5 519 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 ZNF610Q8N9Z0 462 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 NUP43Q8NFH3 380 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 FAM110BQ8TC76 370 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 AGR3Q8TD06 166 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 LRRC46Q96FV0 321 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 ADGRG7Q96K78 797 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 DACH2Q96NX9 599 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 REEP4Q9H6H4 257 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 NTMQ9P121 344 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 CLEC4AQ9UMR7 237 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 KCNE3Q9Y6H6 103 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 DSCAMO60469 2012 aa12.18□□□□□ -0.46
VPS18-203ENST00000558855 ANK3Q12955 4377 aaKnown RBP12.18□□□□□ -0.46
VPS18-203ENST00000558855 SLC28A1O00337 649 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 MSTNO14793 375 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 SLITRK5O94991 958 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 KCNK2O95069 426 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 IFI6P09912 130 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 PRPS2P11908 318 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 PSMA4P25789 261 aaKnown RBP12.17□□□□□ -0.46
VPS18-203ENST00000558855 CCT5P48643 541 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 ARL13AQ5H913 290 aaPredicted RBP12.17□□□□□ -0.46
VPS18-203ENST00000558855 FBXW10Q5XX13 1052 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 RNF165Q6ZSG1 346 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 TRABD2AQ86V40 505 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 OR7A2PQ8NGA2 310 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 PPCDCQ96CD2 204 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 ARSGQ96EG1 525 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 PGM2Q96G03 612 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 ZNF764Q96H86 408 aaPredicted RBP12.17□□□□□ -0.46
VPS18-203ENST00000558855 APOPT1Q96IL0 206 aa12.17□□□□□ -0.46
VPS18-203ENST00000558855 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms