RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 HRH3Q9Y5N1 445 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SDK1Q7Z5N4 2213 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CPED1A4D0V7 1026 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 C7orf72A4D263 438 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LRIT2A6NDA9 550 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 H0YGG7 62 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PSMD12O00232 456 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GPR171O14626 319 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MRASO14807 208 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SCAMP2O15127 329 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LCMT2O60294 686 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NDUFS6O75380 124 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LGI1O95970 557 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 B3GALT4O96024 378 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GNAO1P09471 354 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HSMCR30P0CW71 290 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 UQCRBP14927 111 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NAGAP17050 411 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MAGP20916 626 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 AGAP20933 346 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ATP6V1B2P21281 511 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HSPA13P48723 471 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HTR6P50406 440 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CCR4P51679 360 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SUMO3P55854 103 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 STXBP1P61764 594 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TUBA4AP68366 448 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MAD2L1Q13257 205 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MED21Q13503 144 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BAK1Q16611 211 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GSTA3Q16772 222 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPATS1Q496A3 300 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RIPPLY2Q5TAB7 128 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 KHDRBS2Q5VWX1 349 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NKAIN2Q5VXU1 208 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF385CQ66K41 422 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CYP20A1Q6UW02 462 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 USP53Q70EK8 1073 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TRILQ7L0X0 811 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 KCTD9Q7L273 389 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CAMKMTQ7Z624 323 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 UBE3DQ7Z6J8 389 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SLCO6A1Q86UG4 719 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF761Q86XN6 746 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 FUNDC1Q8IVP5 155 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MCATQ8IVS2 390 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 METTL25Q8N6Q8 603 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF655Q8N720 491 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CDYL2Q8N8U2 506 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BHLHE23Q8NDY6 225 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SRFBP1Q8NEF9 429 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ADCY4Q8NFM4 1077 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 OR2L5Q8NG80 312 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 OR10Q1Q8NGQ4 319 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 OR2T11Q8NH01 316 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BBS10Q8TAM1 723 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DNAJB14Q8TBM8 379 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ENKURQ8TC29 256 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SLCO4A1Q96BD0 722 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MS4A6EQ96DS6 147 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ITPKCQ96DU7 683 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PRAP1Q96NZ9 151 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TGM7Q96PF1 710 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CGREF1Q99674 301 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 PARD6GQ9BYG4 376 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 VCXQ9H320 206 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LYRM4Q9HD34 91 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 FAM60AQ9NP50 221 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 LHX9Q9NQ69 397 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 TMEM9Q9P0T7 183 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GPN3Q9UHW5 284 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HIF3AQ9Y2N7 669 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 AP4B1Q9Y6B7 739 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 CCDC187A0A096LP49 1063 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 A0A0A6YYD5 115 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 H0YIG0 161 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HRKO00198 91 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ACOT8O14734 319 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 DSCR3O14972 297 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 NDUFS4O43181 175 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SPRY1O43609 319 aaPredicted RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 FKBP6O75344 327 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ACTL6BO94805 426 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MT-CO3P00414 261 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 HBQ1P09105 142 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SMIM18P0DKX4 95 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ME2P23368 584 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RORAP35398 523 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 BSGP35613 385 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 GATA4P43694 442 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 SMSP52788 366 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RPS16P62249 146 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 ERVK-8P63133 956 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RAE1P78406 368 aaKnown RBP3.8□□□□□ -1.8
ZEB1-212ENST00000558655 MYBPC1Q00872 1141 aa3.8□□□□□ -1.8
ZEB1-212ENST00000558655 RGS1Q08116 209 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms