RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 G3V3Y1 287 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 H0YIV9 168 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 H7C1Q1 480 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 WWP2O00308 870 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 MANBAO00462 879 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 TXNDC9O14530 226 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 DNPH1O43598 174 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ASNA1O43681 348 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ITM2AO43736 263 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 PLIN3O60664 434 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CTNSO60931 367 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KRT38O76015 456 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 LRATO95237 230 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SLU7O95391 586 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 TNFRSF6BO95407 300 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CLDN9O95484 217 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 DDAH2O95865 285 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 IGHEP01854 428 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 C1QCP02747 245 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CLPSP04118 112 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ALPPP05187 535 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SERPINA7P05543 415 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RPS17P08708 135 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 ABHD2P08910 425 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RBP1P09455 135 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SLC35G6P0C7Q6 338 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 TMIGD3P0DMS9 266 aaPredicted RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 IMPDH1P20839 514 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CXCR2P25025 360 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 GALNSP34059 522 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 DEKP35659 375 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 SERPINB9P50453 376 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CCNG1P51959 295 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 PRKAA2P54646 552 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 NAGLUP54802 743 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RAB38P57729 211 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KCNK10P57789 538 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SLC26A5P58743 744 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 HSF1Q00613 529 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CFHR3Q02985 330 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SLC18A2Q05940 514 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ZNF33BQ06732 778 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RGS1Q08116 209 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 TBL3Q12788 808 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 AIMP2Q13155 320 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 MFAP5Q13361 173 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 NAB1Q13506 487 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 HERC3Q15034 1050 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CDKL4Q5MAI5 379 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ACER2Q5QJU3 275 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 AGAP7PQ5VUJ5 663 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KHDRBS2Q5VWX1 349 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 LIPJQ5W064 366 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 FAM90A2PQ658T7 463 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 SUMO4Q6EEV6 95 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CLEC6AQ6EIG7 209 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 MED27Q6P2C8 311 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 IGFL3Q6UXB1 125 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ISLR2Q6UXK2 745 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ZCCHC23Q6ZST2 131 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 LRRC70Q7Z2Q7 622 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RPS19BP1Q86WX3 136 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 C10orf107Q8IVU9 208 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 IQCKQ8N0W5 287 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 TCAIMQ8N3R3 496 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CCNYL1Q8N7R7 359 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 APCDD1LQ8NCL9 501 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 OR2T11Q8NH01 316 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 GRHL3Q8TE85 626 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ZNF721Q8TF20 911 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 DPF1Q92782 380 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 HAS2Q92819 552 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 NCLNQ969V3 563 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ATP6V1E2Q96A05 226 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 TM4SF18Q96CE8 201 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 RITA1Q96K30 269 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 EGLN2Q96KS0 407 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 AGAP4Q96P64 663 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 MRPL57Q9BQC6 102 aaKnown RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 NTMT1Q9BV86 223 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 GATA5Q9BWX5 397 aaPredicted RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 TUBB1Q9H4B7 451 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 EHD1Q9H4M9 534 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KCNK13Q9HB14 408 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 DEPPQ9NTK1 212 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 CES1P1Q9UKY3 287 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 GRID1Q9ULK0 1009 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 VPS4AQ9UN37 437 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 ANGPTL3Q9Y5C1 460 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 HEMK1Q9Y5R4 338 aaPredicted RBP3.91□□□□□ -1.78
SPG11-211ENST00000558561 POLEQ07864 2286 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 KIAA1549Q9HCM3 1950 aa3.91□□□□□ -1.78
SPG11-211ENST00000558561 USP9XQ93008 2570 aaPredicted RBP3.9□□□□□ -1.78
SPG11-211ENST00000558561 A0A0A6YYD5 115 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 TRBV11-1A0A0K0K1C0 115 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 IQANK1A0A1B0GTG1 560 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 A0A1W2PQ72 361 aa3.9□□□□□ -1.79
SPG11-211ENST00000558561 CLEC18AA5D8T8 446 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms