RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 OR2J2O76002 312 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 LGI1O95970 557 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 OPN1SWP03999 348 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 ITGA2P17301 1181 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 SPINK2P20155 84 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 RPP38P78345 283 aaKnown RBP13.7□□□□□ -0.22
VPS18-202ENST00000558474 KCNJ10P78508 379 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 Q0VFX4 171 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 NTRK2Q16620 822 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 MEP1AQ16819 746 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 DUSP7Q16829 419 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 KLHL26Q53HC5 615 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 TBCELQ5QJ74 424 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 TMEM81Q6P7N7 255 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 ENPP6Q6UWR7 440 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 GALNT10Q86SR1 603 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 PYDC1Q8WXC3 89 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 SLCO4A1Q96BD0 722 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 TMCO6Q96DC7 493 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 TPD52L3Q96J77 140 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 CCDC86Q9H6F5 360 aaKnown RBP13.7□□□□□ -0.22
VPS18-202ENST00000558474 STX18Q9P2W9 335 aaKnown RBP13.7□□□□□ -0.22
VPS18-202ENST00000558474 SLC13A4Q9UKG4 626 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 AURKCQ9UQB9 309 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 SLC35A3Q9Y2D2 325 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 SLC9A8Q9Y2E8 581 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 DTNAQ9Y4J8 743 aa13.7□□□□□ -0.22
VPS18-202ENST00000558474 AHCTF1Q8WYP5 2266 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 H3BNH8 94 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 SCDO00767 359 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 TLX3O43711 291 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 DPM1O60762 260 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 KRT36O76013 467 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 UTS2O95399 124 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 FABP3P05413 133 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 CYP4B1P13584 511 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 HPGDP15428 266 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 RFX3P48380 749 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 CLK3P49761 638 aaKnown RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 SSR4P51571 173 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 EEF1A1P68104 462 aaKnown RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 CDC20Q12834 499 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 FGFBP1Q14512 234 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 LYPD8Q6UX82 237 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 MISPQ8IVT2 679 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 SMYD1Q8NB12 490 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 GPR32P1Q8NGA4 272 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 THAP3Q8WTV1 239 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 RNF138Q8WVD3 245 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 APOBEC4Q8WW27 367 aaKnown RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 NR4A3Q92570 626 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 EFHD2Q96C19 240 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 SPACA9Q96E40 222 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 THOC3Q96J01 351 aaKnown RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 ZNF347Q96SE7 839 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 ADOQ96SZ5 270 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 SEPHS2Q99611 448 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 ARHGDIGQ99819 225 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 CDCP1Q9H5V8 836 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 C6orf203Q9P0P8 240 aaPredicted RBP13.69□□□□□ -0.22
VPS18-202ENST00000558474 ABI3Q9P2A4 366 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 KCNE5Q9UJ90 142 aa13.69□□□□□ -0.22
VPS18-202ENST00000558474 CDHR4A6H8M9 788 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ALG1L2C9J202 215 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 H3BNX3 289 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 TP53I11O14683 189 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 KLK10O43240 276 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ATP6V1G2O95670 118 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 OXSR1O95747 527 aaPredicted RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 IFNW1P05000 195 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 CELA2AP08217 269 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 GK3PQ14409 553 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 MAPK14Q16539 360 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 NRF1Q16656 503 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ZNF791Q3KP31 576 aaPredicted RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 GRAMD1BQ3KR37 738 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 PDZK1Q5T2W1 519 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ZNF836Q6ZNA1 936 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 VTCN1Q7Z7D3 282 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ZAR1Q86SH2 424 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 VRK2Q86Y07 508 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ZNF440Q8IYI8 595 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 FAM86B1Q8N7N1 296 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 OR4C3Q8NH37 302 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 ASB15Q8WXK1 588 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 PSMF1Q92530 271 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 HGDQ93099 445 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 C7orf34Q96L11 122 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 LMF1Q96S06 567 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 POLR2J2Q9GZM3 115 aaKnown RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 QRSL1Q9H0R6 528 aaKnown RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 POLR2J3Q9H1A7 115 aaKnown RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 LIN28AQ9H9Z2 209 aaKnown RBP13.68□□□□□ -0.22
VPS18-202ENST00000558474 RNPEPL1Q9HAU8 725 aa13.68□□□□□ -0.22
VPS18-202ENST00000558474 SERINC4A6NH21 518 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms