RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 A8MUA0 341 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 GABRPO00591 440 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 IFNGR1P15260 489 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 ZP3P21754 424 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 PAX6P26367 422 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 CALCRP30988 508 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 GDNFP39905 211 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 HENMT1Q5T8I9 393 aaKnown RBP11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 NDUFAF7Q7L592 441 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 TRAM1L1Q8N609 369 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR52P1PQ8NH57 321 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 MITD1Q8WV92 249 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 YIPF5Q969M3 257 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 ACTRT3Q9BYD9 372 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 SRMSQ9H3Y6 488 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 CAMK2AQ9UQM7 478 aa11.15□□□□□ -0.63
CSPG4P12-201ENST00000558282 GPR137BO60478 399 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 APEX1P27695 318 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 VIPR1P32241 457 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 LRRC32Q14392 662 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 C17orf107Q6ZR85 190 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 KDM8Q8N371 416 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR9A1PQ8NGU1 263 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ZNF461Q8TAF7 563 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SLAMF7Q9NQ25 335 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 A0A1W2PQ45 241 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 A0A1W2PQY0 241 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 MAFKO60675 156 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 DRD2P14416 443 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 RSU1Q15404 277 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR4M1Q8NGD0 313 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 WDR20Q8TBZ3 569 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 HOXB13Q92826 284 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 B3GAT2Q9NPZ5 323 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 LTN1O94822 1766 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ANHXE9PGG2 379 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SCAF4O95104 1147 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 TLE4Q04727 773 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ZNF91Q05481 1191 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CCINQ13939 588 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ACTBL2Q562R1 376 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 YIF1BQ5BJH7 314 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 IGSF11Q5DX21 431 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SLC18B1Q6NT16 456 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 RBMS3Q6XE24 437 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CHST9Q7L1S5 443 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CPOQ8IVL8 374 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 C1orf87Q8N0U7 546 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 DUSP19Q8WTR2 217 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ISL2Q96A47 359 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 BORCS8Q96FH0 119 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 TMEM19Q96HH6 336 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 HRASLS5Q96KN8 279 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 NMNAT2Q9BZQ4 307 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR2AG1Q9H205 316 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 VAPAQ9P0L0 249 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 A0A0G2JN53 185 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 ZCWPW2A0A1B0GU75 182 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 PRAMEF11O60813 436 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 C1GALT1C1LP0DN25 315 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CPT2P23786 658 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SEC61A1P61619 476 aaKnown RBP11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 EVX2Q03828 476 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SELENBP1Q13228 472 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SCGB2A2Q13296 93 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 DGKZQ13574 1117 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 RAB33AQ14088 237 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 CARD16Q5EG05 197 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 RGMBQ6NW40 437 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 NLRC3Q7RTR2 1065 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 IL17RDQ8NFM7 739 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 AKR7LQ8NHP1 331 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 LIN7BQ9HAP6 207 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 PCDHAC2Q9Y5I4 1007 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 STYXL1Q9Y6J8 313 aa11.14□□□□□ -0.63
CSPG4P12-201ENST00000558282 PEAK1Q9H792 1746 aa11.13□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR2F2O95006 317 aa11.13□□□□□ -0.63
CSPG4P12-201ENST00000558282 CBR1P16152 277 aa11.13□□□□□ -0.63
CSPG4P12-201ENST00000558282 RPL23AP62750 156 aaKnown RBP11.13□□□□□ -0.63
CSPG4P12-201ENST00000558282 RANP62826 216 aaKnown RBP11.13□□□□□ -0.63
CSPG4P12-201ENST00000558282 OR2F1Q13607 317 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms