RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SERPINA11Q86U17 422 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 SLC15A3Q8IY34 581 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ZNF619Q8N2I2 560 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ZNF614Q8N883 585 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ZNF527Q8NB42 609 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 FAM98AQ8NCA5 519 aaKnown RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 OR2M7Q8NG81 312 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 SLC39A7Q92504 469 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 JSRP1Q96MG2 331 aaPredicted RBP19.48■□□□□ 0.71
CASC4-204ENST00000557945 FAM173AQ9BQD7 235 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ANGPTL4Q9BY76 406 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 TMEM38AQ9H6F2 299 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 NDE1Q9NXR1 346 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ADA2Q9NZK5 511 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ABCG2Q9UNQ0 655 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 AP3M1Q9Y2T2 418 aa19.48■□□□□ 0.71
CASC4-204ENST00000557945 ANKRD33BA6NCL7 494 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 C2orf72A6NCS6 295 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 KIAA0513O60268 411 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 FADS1O60427 444 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 TBXA2RP21731 343 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 SNTA1Q13424 505 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 SCARB2Q14108 478 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 MAPK11Q15759 364 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 ADRM1Q16186 407 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 ZNF630Q2M218 657 aaPredicted RBP19.47■□□□□ 0.71
CASC4-204ENST00000557945 RPS26P11Q5JNZ5 115 aaPredicted RBP19.47■□□□□ 0.71
CASC4-204ENST00000557945 SLC30A6Q6NXT4 461 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 C16orf89Q6UX73 402 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 HMGN2P46Q86SG4 172 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 MARCH3Q86UD3 253 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 POGLUT1Q8NBL1 392 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 C11orf65Q8NCR3 313 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 SLC38A1Q9H2H9 487 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 RUBCNLQ9H714 662 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 PROK2Q9HC23 129 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 SPAG4Q9NPE6 437 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 PCDHGA10Q9Y5H3 936 aa19.47■□□□□ 0.71
CASC4-204ENST00000557945 PINLYPA6NC86 204 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 SNX4O95219 450 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 RASAL1O95294 804 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 GUSBP08236 651 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 PTGDSP41222 190 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 MASP1P48740 699 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 RNF144AP50876 292 aaPredicted RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 TMEM81Q6P7N7 255 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 NET1Q7Z628 596 aaPredicted RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 PACS2Q86VP3 889 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 IFNEQ86WN2 208 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 PTOV1Q86YD1 416 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 ZZZ3Q8IYH5 903 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 PGAM4Q8N0Y7 254 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 METTL25Q8N6Q8 603 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 GATSQ8NAP1 163 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 TREX2Q9BQ50 279 aaPredicted RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 SPATA9Q9BWV2 254 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 SAP130Q9H0E3 1048 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 QRSL1Q9H0R6 528 aaKnown RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 MTHFD2LQ9H903 347 aaPredicted RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 ANGPT4Q9Y264 503 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 KMT2BQ9UMN6 2715 aaPredicted RBP19.46■□□□□ 0.71
CASC4-204ENST00000557945 SPTA1P02549 2419 aa19.46■□□□□ 0.71
CASC4-204ENST00000557945 A0A0G2JPF8 293 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 HNRNPCL2B2RXH8 293 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 HNRNPCL3B7ZW38 293 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 NME4O00746 187 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 HNRNPCL1O60812 293 aaKnown RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 NGFRP08138 427 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 HNRNPCL4P0DMR1 293 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 RFC3P40938 356 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 GZMMP51124 257 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 PMP22Q01453 160 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 PLGLB1Q02325 96 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 LIPEQ05469 1076 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 RBBP4Q09028 425 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 PDZK1Q5T2W1 519 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 REEP3Q6NUK4 255 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 APOOLQ6UXV4 268 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 RINLQ6ZS11 566 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 CALHM3Q86XJ0 350 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 DEFB107AQ8IZN7 70 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 Q8NA96 180 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 RBM15BQ8NDT2 890 aaKnown RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 RNF138Q8WVD3 245 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 ZNF583Q96ND8 569 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 BBC3Q96PG8 261 aaPredicted RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 CACYBPQ9HB71 228 aaKnown RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 SDHAF3Q9NRP4 125 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 TUBA8Q9NY65 449 aaPredicted RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 BOKQ9UMX3 212 aaPredicted RBP19.45■□□□□ 0.7
CASC4-204ENST00000557945 USP22Q9UPT9 525 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 WIF1Q9Y5W5 379 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 ZFYVE26Q68DK2 2539 aa19.45■□□□□ 0.7
CASC4-204ENST00000557945 NPIPB9F8W1W9 429 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 NDUFB5O43674 189 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 UGT2B17O75795 530 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 PGM3O95394 542 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 AQP1P29972 269 aa19.44■□□□□ 0.7
CASC4-204ENST00000557945 VMACQ2NL98 169 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms