RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 SCDO00767 359 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 GMFGO60234 142 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 WISP1O95388 367 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
USP3-205ENST00000557884 AGR2O95994 175 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 HPGDP15428 266 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 TBXA2RP21731 343 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 TCEA1P23193 301 aaKnown RBP13.08□□□□□ -0.32
USP3-205ENST00000557884 DCTP40126 519 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ANXA11P50995 505 aaKnown RBP13.08□□□□□ -0.32
USP3-205ENST00000557884 MVDP53602 400 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 SLC10A1Q14973 349 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 GPR68Q15743 365 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 SYPL1Q16563 259 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 GPAT3Q53EU6 434 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 KRTCAP3Q53RY4 240 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 LRIF1Q5T3J3 769 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 HEPHL1Q6MZM0 1159 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 HMGN2P46Q86SG4 172 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
USP3-205ENST00000557884 SNX32Q86XE0 403 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 PLCZ1Q86YW0 608 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 SPPL2CQ8IUH8 684 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 GHDCQ8N2G8 530 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ZNF614Q8N883 585 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ANKFN1Q8N957 763 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 OR4K17Q8NGC6 315 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 ROPN1LQ96C74 230 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 UBQLN4Q9NRR5 601 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 MKLN1Q9UL63 735 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 OSGIN2Q9Y236 505 aa13.08□□□□□ -0.32
USP3-205ENST00000557884 FASNP49327 2511 aaKnown RBP13.07□□□□□ -0.32
USP3-205ENST00000557884 LOC100653049A0A140TA62 436 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 B4DXG7 233 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 ALG1L2C9J202 215 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 FBP2O00757 339 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 FCMRO60667 390 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 STX11O75558 287 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 KRT34O76011 436 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 AK1P00568 194 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
USP3-205ENST00000557884 LCN1P31025 176 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 HPCAP84074 193 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 NFYCQ13952 458 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 DLEU7Q6UYE1 221 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 BNC2Q6ZN30 1099 aaPredicted RBP13.07□□□□□ -0.32
USP3-205ENST00000557884 TRILQ7L0X0 811 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 YRDCQ86U90 279 aaKnown RBP13.07□□□□□ -0.32
USP3-205ENST00000557884 POU5F2Q8N7G0 328 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 PRR7Q8TB68 274 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 TSPEARQ8WU66 669 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 TRIM8Q9BZR9 551 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 UBQLN3Q9H347 655 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 DSN1Q9H410 356 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 EXO5Q9H790 373 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 MRGBPQ9NV56 204 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 MED11Q9P086 117 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 TNFRSF10DQ9UBN6 386 aa13.07□□□□□ -0.32
USP3-205ENST00000557884 SHANK1Q9Y566 2161 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 TRBV5-3A0A0A0MS03 114 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 TRGV5A0A0B4J1U4 118 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CENPVL1A0A0U1RR11 272 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NPIPB9F8W1W9 429 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NDUFB5O43674 189 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CCDC22O60826 627 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 H6PDO95479 791 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NGFRP08138 427 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CHRM4P08173 479 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NUDT7P0C024 238 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 NR2F1P10589 423 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 ATP12AP54707 1039 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 DSTNP60981 165 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CHRNEQ04844 493 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 RBPJQ06330 500 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CAPRIN1Q14444 709 aaKnown RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 RGNQ15493 299 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 MAPRE2Q15555 327 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CD226Q15762 336 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 EIPR1Q53HC9 387 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 PDZK1Q5T2W1 519 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 REP15Q6BDI9 236 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 TYW3Q6IPR3 259 aaKnown RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 FRRS1Q6ZNA5 592 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 CHERPQ8IWX8 916 aaKnown RBP13.06□□□□□ -0.32
USP3-205ENST00000557884 DPP10Q8N608 796 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
USP3-205ENST00000557884 OR2M3Q8NG83 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms