RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 EDEM2Q9BV94 578 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 STRADBQ9C0K7 418 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 HOXD1Q9GZZ0 328 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 APMAPQ9HDC9 416 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 TMEM9BQ9NQ34 198 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 RLIMQ9NVW2 624 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 NXT1Q9UKK6 140 aaKnown RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 NDRG4Q9ULP0 352 aaKnown RBP11.55□□□□□ -0.56
SHMT2-233ENST00000557529 SEC16AO15027 2179 aa11.55□□□□□ -0.56
SHMT2-233ENST00000557529 CENPVL1A0A0U1RR11 272 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 IDSB3KWA1 339 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NPIPB9F8W1W9 429 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 MEN1O00255 615 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 FRS3O43559 492 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 OR10H3O60404 316 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 GASTP01350 101 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 IGKV1D-16P01601 117 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 KLK3P07288 261 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SMIM18P0DKX4 95 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CYP4B1P13584 511 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CLK3P49761 638 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 EFNA3P52797 238 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ATP12AP54707 1039 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NUP107P57740 925 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ESRRGP62508 458 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TOP3AQ13472 1001 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 RBM48Q5RL73 367 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 HLA-DQA1Q5Y7H0 255 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SLC29A4Q7RTT9 530 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ZAR1Q86SH2 424 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TSPYL5Q86VY4 417 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 GRAMD2AQ8IUY3 354 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TSPAN14Q8NG11 270 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 OR1N1Q8NGS0 311 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SLC7A13Q8TCU3 470 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 HDAC2Q92769 488 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 DIO2Q92813 273 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 LCORQ96JN0 433 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CMKLR1Q99788 373 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CTRCQ99895 268 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NIPSNAP1Q9BPW8 284 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NUDT9Q9BW91 350 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 UCK2Q9BZX2 261 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 WDR54Q9H977 334 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 C11orf16Q9NQ32 467 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TESQ9UGI8 421 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 KCNE5Q9UJ90 142 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NPIPA5A0A0B4J1W7 369 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 C2orf92A0A1B0GVN3 265 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TRIM64A6NGJ6 449 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 A6NHS1 94 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CLDN24A6NM45 220 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CPSF4LA6NMK7 179 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NPIPA7E9PJI5 369 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 E9PQ18 207 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TPST2O60704 377 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ALOX12BO75342 701 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 IL33O95760 270 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CLPTM1O96005 669 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NPIPA8P0DM63 369 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF136P52737 540 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 EMP2P54851 167 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ISL1P61371 349 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TUBA4AP68366 448 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 RPP38P78345 283 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 IL5RAQ01344 420 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 CD47Q08722 323 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 COX10Q12887 443 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 APOFQ13790 326 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SEC23BQ15437 767 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 NNATQ16517 81 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ENTPD8Q5MY95 495 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 PDZK1Q5T2W1 519 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 PGBD2Q6P3X8 592 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ANKRD37Q7Z713 158 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF321PQ8N8H1 164 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 C17orf47Q8NEP4 570 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 OR4K5Q8NGD3 323 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ADIPOR1Q96A54 375 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SLC41A3Q96GZ6 507 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 ZNF559Q9BR84 538 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 SLC39A1Q9NY26 324 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 C19orf25Q9UFG5 118 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 GPN3Q9UHW5 284 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-233ENST00000557529 BLOC1S6Q9UL45 172 aa11.54□□□□□ -0.56
SHMT2-233ENST00000557529 A0A087WXM4 84 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 TRAPPC13A5PLN9 417 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 DPPA5A6NC42 116 aa11.53□□□□□ -0.56
SHMT2-233ENST00000557529 TO15178 435 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms