RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RHCEP18577 417 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 RRM2P31350 389 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 OTX2P32243 289 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 KRT20P35900 424 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 YAP1P46937 504 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 IST1P53990 364 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 SPIBQ01892 262 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 NPTX1Q15818 432 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 BTBD16Q32M84 506 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 PDZK1Q5T2W1 519 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 MRPL2Q5T653 305 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 DEF8Q6ZN54 512 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZBTB49Q6ZSB9 765 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 NDUFAF7Q7L592 441 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 CYP4Z1Q86W10 505 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 RBM45Q8IUH3 476 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 PRR22Q8IZ63 422 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 CLIP4Q8N3C7 705 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 CBR4Q8N4T8 237 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 PACRGLQ8N7B6 248 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 OR6T1Q8NGN1 323 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 ELP5Q8TE02 316 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 OIT3Q8WWZ8 545 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 DIO2Q92813 273 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 OMA1Q96E52 524 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 EPYCQ99645 322 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 PIP5K1AQ99755 562 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 WFDC6Q9BQY6 131 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 HOXD1Q9GZZ0 328 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 EVA1AQ9H8M9 152 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 ASCL3Q9NQ33 180 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 SAMHD1Q9Y3Z3 626 aaKnown RBP13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
ARHGEF40-208ENST00000557498 LOC101059948A0A1B0GTJ6 334 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 CLDN24A6NM45 220 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 PDLIM1O00151 329 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 SOCS2O14508 198 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 TSPAN2O60636 221 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 REM1O75628 298 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 RASAL1O95294 804 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 UTS2O95399 124 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 FPR1P21462 350 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 F8A1P23610 371 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 IL12BP29460 328 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 DNAJA1P31689 397 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 AQP4P55087 323 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 RGS8P57771 180 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 FGFBP1Q14512 234 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZSWIM7Q19AV6 140 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 PLAG1Q6DJT9 500 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 TCTN3Q6NUS6 607 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 SHQ1Q6PI26 577 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 HIPK1Q86Z02 1210 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZDHHC13Q8IUH4 622 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 GALNT4Q8N4A0 578 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZNF614Q8N883 585 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 M1APQ8TC57 530 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 NKD1Q969G9 470 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 PRRC1Q96M27 445 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ZNF184Q99676 751 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 SLC29A1Q99808 456 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ARMC7Q9H6L4 198 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 LIN28AQ9H9Z2 209 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 MMP25Q9NPA2 562 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 RLIMQ9NVW2 624 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 KCND3Q9UK17 655 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 ACAD8Q9UKU7 415 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 PCDHGA6Q9Y5G7 932 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 U3KQV3 271 aa13.34□□□□□ -0.27
ARHGEF40-208ENST00000557498 A0A0C4DFX4 3053 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 CDHR4A6H8M9 788 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 TMEM200CA6NKL6 621 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 G3V2T6 193 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 EI24O14681 340 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 FFAR1O14842 300 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 FRS3O43559 492 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 SEMA7AO75326 666 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 DXOO77932 396 aaKnown RBP13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 NADKO95544 446 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 HPP00738 406 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 CYP4B1P13584 511 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 ABCD3P28288 659 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 PNLIPRP2P54317 469 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 CDH12P55289 794 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 NRG3P56975 720 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 PLAURQ03405 335 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 IL10RAQ13651 578 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 GK3PQ14409 553 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 TBPL2Q6SJ96 375 aa13.33□□□□□ -0.28
ARHGEF40-208ENST00000557498 STK32CQ86UX6 486 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms