RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 HIST1H2AGP0C0S8 130 aaPredicted RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 ZNF883P0CG24 379 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MBL2P11226 248 aaPredicted RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 DESP17661 470 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 OXTRP30559 389 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 KIF5BP33176 963 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 S100A5P33763 92 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 TRIM23P36406 574 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CD86P42081 329 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 SRPXP78539 464 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 SNX1Q13596 522 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 KIF26BQ2KJY2 2108 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 BOLA3Q53S33 107 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 LRRC31Q6UY01 552 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CDHR3Q6ZTQ4 885 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 YRDCQ86U90 279 aaKnown RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 LRRC17Q8N6Y2 441 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CNNM3Q8NE01 707 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 OR1K1Q8NGR3 316 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 OR4F5Q8NH21 305 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 RDH11Q8TC12 318 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 LRRC15Q8TF66 581 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 ANKRD49Q8WVL7 239 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 PCNPQ8WW12 178 aaKnown RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 HIST1H2ACQ93077 130 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 SLC35B4Q969S0 331 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MRPL38Q96DV4 380 aaKnown RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 SLC45A3Q96JT2 553 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 ACCSQ96QU6 501 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CBWD1Q9BRT8 395 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CABLES2Q9BTV7 478 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 CCDC28BQ9BUN5 200 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 FTHL17Q9BXU8 183 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 EGLN1Q9GZT9 426 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MOB1AQ9H8S9 216 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 BATF3Q9NR55 127 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 SOHLH2Q9NX45 425 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 THYN1Q9P016 225 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 IL20RAQ9UHF4 553 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MUTYHQ9UIF7 546 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 HOOK1Q9UJC3 728 aaKnown RBP3.78□□□□□ -1.8
PRPF39-212ENST00000557477 ENTPD4Q9Y227 616 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 PLEKHA6Q9Y2H5 1048 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 LOC285556D6RIA3 1793 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 MAST2Q6P0Q8 1798 aa3.78□□□□□ -1.8
PRPF39-212ENST00000557477 GAKO14976 1311 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ZMYM6O95789 1325 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 SALL1Q9NSC2 1324 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 TRGV8A0A0C4DH27 118 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 GOLGA6L4A6NEF3 574 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ASB14A6NK59 587 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 A8MXK9 166 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 TSPAN2O60636 221 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 FCER2P06734 321 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 OR9G9P0C7N8 305 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 CYP11B1P15538 503 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 PTPN4P29074 926 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ADORA1P30542 326 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 SLC1A6P48664 564 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 NPY2RP49146 381 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 CD300CQ08708 224 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 FASTKQ14296 549 aaKnown RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 SIX1Q15475 284 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 FCN2Q15485 313 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 AGKQ53H12 422 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 UNC50Q53HI1 259 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 SMUG1Q53HV7 270 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 TMEM31Q5JXX7 168 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 IRGCQ6NXR0 463 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 TMEM26Q6ZUK4 368 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 LINC00518Q8N0U6 118 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 BANPQ8N9N5 519 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ICA1LQ8NDH6 482 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 LZICQ8WZA0 190 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 PHYHIPQ92561 330 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF689Q96CS4 500 aaPredicted RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ALS2CR12Q96Q35 445 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 VGLL1Q99990 258 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 LRRC61Q9BV99 259 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 NLNQ9BYT8 704 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 STRADBQ9C0K7 418 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 NT5DC2Q9H857 520 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 CNOT2Q9NZN8 540 aaKnown RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 NOSIPQ9Y314 301 aaKnown RBP3.77□□□□□ -1.81
PRPF39-212ENST00000557477 CLCA3PQ9Y6N3 262 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 ATAD5Q96QE3 1844 aa3.77□□□□□ -1.81
PRPF39-212ENST00000557477 A0A0C4DFX4 3053 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 MROH7Q68CQ1 1323 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 COL2A1P02458 1487 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 NTN3O00634 580 aaPredicted RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 RASGRF2O14827 1237 aa3.76□□□□□ -1.81
PRPF39-212ENST00000557477 IDH1O75874 414 aaKnown RBP3.76□□□□□ -1.81
PRPF39-212ENST00000557477 FLOT1O75955 427 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms