RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LSM1O15116 133 aaKnown RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 AKAP10O43572 662 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 NKX2-2O95096 273 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 ANGPTL1O95841 491 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 HRGP04196 525 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 LINC00032P0C843 101 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 KLK2P20151 261 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 FRKP42685 505 aaPredicted RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 ASMTP46597 345 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 PRKAG1P54619 331 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 MANFP55145 182 aaKnown RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 PDE7AQ13946 482 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 KEAP1Q14145 624 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 POU4F3Q15319 338 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 GRAMD1BQ3KR37 738 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 GLYR1Q49A26 553 aaPredicted RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 VWA1Q6PCB0 445 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 Q6ZSR9 355 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 DDIASQ8IXT1 998 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 NUP43Q8NFH3 380 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 OR5M1Q8NGP8 315 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 CLHC1Q8NHS4 586 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 TWIST2Q8WVJ9 160 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 SLC9A6Q92581 669 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 TUBB1Q9H4B7 451 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 ACSS1Q9NUB1 689 aaPredicted RBP12.78□□□□□ -0.36
SNX6-210ENST00000557341 SH3BP4Q9P0V3 963 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 ZNF337Q9Y3M9 751 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 TESMINQ9Y4I5 508 aa12.78□□□□□ -0.36
SNX6-210ENST00000557341 CASKO14936 926 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 GMFGO60234 142 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 TNFRSF21O75509 655 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 ATE1O95260 518 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 IGKV1D-16P01601 117 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 FCGR2AP12318 317 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 ZNF17P17021 662 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
SNX6-210ENST00000557341 HPCAL1P37235 193 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 MAP3K8P41279 467 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 CLDN20P56880 219 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.37
SNX6-210ENST00000557341 FGFBP1Q14512 234 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 PON3Q15166 354 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 RFTN2Q52LD8 501 aaPredicted RBP12.77□□□□□ -0.37
SNX6-210ENST00000557341 FBXO30Q8TB52 745 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 FIG4Q92562 907 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 L2HGDHQ9H9P8 463 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 RNF122Q9H9V4 155 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
SNX6-210ENST00000557341 NTMQ9P121 344 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 STOML1Q9UBI4 398 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
SNX6-210ENST00000557341 VDAC3Q9Y277 283 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 ZNF175Q9Y473 711 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.37
SNX6-210ENST00000557341 DSCAMO60469 2012 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 TLDC2A0PJX2 215 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 TMEM233B4DJY2 109 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 H0YC42 278 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 PIP5K1BO14986 540 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 EMC8O43402 210 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 NDUFB5O43674 189 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 NPHS1O60500 1241 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 OXSR1O95747 527 aaPredicted RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 CHRNGP07510 517 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 NGFRP08138 427 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 ACP2P11117 423 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 MAPK1P28482 360 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 ALDH3A1P30838 453 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 RPL3P39023 403 aaKnown RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 PCYT1AP49585 367 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 TPD52P55327 224 aaPredicted RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 CLDN15P56746 228 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 SIRPAP78324 504 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 OCRLQ01968 901 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNX6-210ENST00000557341 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 MFSD12Q6NUT3 480 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 APOOLQ6UXV4 268 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 R3HCC1LQ7Z5L2 792 aaKnown RBP12.76□□□□□ -0.37
SNX6-210ENST00000557341 GALNT10Q86SR1 603 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 TRABD2AQ86V40 505 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 EXOC3L1Q86VI1 746 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 METTL25Q8N6Q8 603 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 COX18Q8N8Q8 333 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 BANPQ8N9N5 519 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 OR6Y1Q8NGX8 325 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 JADE3Q92613 823 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
SNX6-210ENST00000557341 GIMAP5Q96F15 307 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms