RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PPP6CO00743 305 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 ADAP00813 363 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 GFAPP14136 432 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 CFPP27918 469 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 CRABP2P29373 138 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 PSPHP78330 225 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 MRPS22P82650 360 aaKnown RBP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 P2RY6Q15077 328 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 CYP27C1Q4G0S4 372 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 SGO1Q5FBB7 561 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 CLEC2AQ6UVW9 174 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 RAPH1Q70E73 1250 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 TBC1D1Q86TI0 1168 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 OR2V1Q8NHB1 315 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 OSTF1Q92882 214 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 NSUN5Q96P11 429 aaKnown RBP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 ALG2Q9H553 416 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 MCTS1Q9ULC4 181 aaKnown RBP11.12□□□□□ -0.63
PSEN1-221ENST00000557293 HMX2A2RU54 273 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 VWC2LB2RUY7 222 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 UBFD1O14562 309 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TNFSF11O14788 317 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 EFNA2O43921 213 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 GMFGO60234 142 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 SYNGR4O95473 234 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 IL33O95760 270 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 ANGPTL1O95841 491 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 PDYNP01213 254 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 IGKV1D-16P01601 117 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 C2P06681 752 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 FESP07332 822 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 COL6A2P12110 1019 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 EGR1P18146 543 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 EDNRAP25101 427 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 SHC1P29353 583 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TTKP33981 857 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 RAC1P63000 192 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 C17orf67Q0P5P2 114 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 CSTF3Q12996 717 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 AGAP6Q5VW22 663 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 METTL2BQ6P1Q9 378 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 Q6ZSR9 355 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 KLHL7Q8IXQ5 586 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 GTPBP8Q8N3Z3 284 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 C1orf52Q8N6N3 182 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 PYROXD1Q8WU10 500 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 CDKL2Q92772 493 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 PROX1Q92786 737 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 MTBPQ96DY7 904 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 ADAD1Q96M93 576 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 PAQR5Q9NXK6 330 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF225Q9UK10 706 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 SLC12A4Q9UP95 1085 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 VDAC3Q9Y277 283 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 OR10H1Q9Y4A9 318 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 TNPO3Q9Y5L0 923 aaKnown RBP11.11□□□□□ -0.63
PSEN1-221ENST00000557293 SNX8Q9Y5X2 465 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
PSEN1-221ENST00000557293 DYSFO75923 2080 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 PSMG1O95456 288 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 IL3P08700 152 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CHN1P15882 459 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 USF1P22415 310 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 IL32P24001 234 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CCNG1P51959 295 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CDH11P55287 796 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 RAE1P78406 368 aaKnown RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 PRR5P85299 388 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 DR1Q01658 176 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ITGADQ13349 1161 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ACAP2Q15057 778 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ERCC6LQ2NKX8 1250 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 GGTA1PQ4G0N0 100 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 SH2D4BQ5SQS7 431 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 CPTPQ5TA50 214 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 LIPNQ5VXI9 398 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 TTC19Q6DKK2 380 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 C3orf62Q6ZUJ4 267 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ESPNLQ6ZVH7 1005 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 RPS27LQ71UM5 84 aaKnown RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 BHLHA15Q7RTS1 189 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 MEX3DQ86XN8 651 aaKnown RBP11.1□□□□□ -0.63
PSEN1-221ENST00000557293 SLC35F6Q8N357 371 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 OR4F6Q8NGB9 312 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ABHD3Q8WU67 409 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 FAM168AQ92567 244 aa11.1□□□□□ -0.63
PSEN1-221ENST00000557293 ATP6V1E2Q96A05 226 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms