RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF226Q9NYT6 803 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 STOML1Q9UBI4 398 aa14.31□□□□□ -0.12
TUBB3-213ENST00000557262 COPEO14579 308 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 PDPK1O15530 556 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 TBX19O60806 448 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 NKX2-2O95096 273 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 IGKV1D-16P01601 117 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 SHBGP04278 402 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 CD8BP10966 210 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 POU2F1P14859 743 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 GPC1P35052 558 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 MAP3K8P41279 467 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 PRKAG1P54619 331 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 MANFP55145 182 aaKnown RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 SIRPAP78324 504 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 NKX6-1P78426 367 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 HSPB3Q12988 150 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 PON3Q15166 354 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 SGCBQ16585 318 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 TMEM44Q2T9K0 475 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 GRAMD1BQ3KR37 738 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 LIPMQ5VYY2 423 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 EXOC3L1Q86VI1 746 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 METTL25Q8N6Q8 603 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 EIF1ADQ8N9N8 165 aaKnown RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF610Q8N9Z0 462 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 ZFP28Q8NHY6 868 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 FNDC9Q8TBE3 224 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 PIK3R3Q92569 461 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 HOXB13Q92826 284 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF764Q96H86 408 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 REEP4Q9H6H4 257 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 EQTNQ9NQ60 294 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 KLHL28Q9NXS3 571 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 C6orf203Q9P0P8 240 aaPredicted RBP14.3□□□□□ -0.12
TUBB3-213ENST00000557262 PCNX3Q9H6A9 2034 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 NAV3Q8IVL0 2385 aa14.3□□□□□ -0.12
TUBB3-213ENST00000557262 C16orf97H3BN30 126 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 AZIN1O14977 448 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 AKAP10O43572 662 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 UGT2B10P36537 528 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 KCNJ5P48544 419 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 RFTN2Q52LD8 501 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 SHEQ5VZ18 495 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 ANKRD26P1Q6NSI1 321 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 RNF165Q6ZSG1 346 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 HOMEZQ8IX15 550 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 GSPT2Q8IYD1 628 aaKnown RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 CDRT4Q8N9R6 151 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 NUP43Q8NFH3 380 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 OR4C3Q8NH37 302 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 FAM110BQ8TC76 370 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 UBLCP1Q8WVY7 318 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 SLC9A6Q92581 669 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 CIDECQ96AQ7 238 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 PPCDCQ96CD2 204 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 ZBED6CLQ96FA7 236 aaPredicted RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 FCRL1Q96LA6 429 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 CCT7Q99832 543 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 MED18Q9BUE0 208 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 SH3BP4Q9P0V3 963 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 NTMQ9P121 344 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 MID2Q9UJV3 735 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 PROCRQ9UNN8 238 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 PTGDR2Q9Y5Y4 395 aa14.29□□□□□ -0.12
TUBB3-213ENST00000557262 FLNAP21333 2647 aaKnown RBP14.29□□□□□ -0.12
TUBB3-213ENST00000557262 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 SMIM23A6NLE4 172 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 DEFB108AA8MXU0 73 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 ALG1L2C9J202 215 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 ARHGEF9O43307 516 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 NDUFB5O43674 189 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 GMFGO60234 142 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 TRIM13O60858 407 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 CHEK2O96017 543 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 NGFRP08138 427 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 LINC00032P0C843 101 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 FCGR2AP12318 317 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 KRT4P19013 534 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 TBXA2RP21731 343 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 CRYGSP22914 178 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 FRKP42685 505 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-213ENST00000557262 SLC18A2Q05940 514 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 ZNF385BQ569K4 471 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 FAM214BQ7L5A3 538 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 BIVMQ86UB2 503 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 CXorf67Q86X51 503 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-213ENST00000557262 C10orf107Q8IVU9 208 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 OR6Y1Q8NGX8 325 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 OR2T11Q8NH01 316 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 PIGTQ969N2 578 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 GIMAP5Q96F15 307 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 C18orf12Q96KH6 178 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 TSSK3Q96PN8 268 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 PIP5K1AQ99755 562 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 TRMOQ9BU70 441 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 GATA5Q9BWX5 397 aaPredicted RBP14.28□□□□□ -0.12
TUBB3-213ENST00000557262 PRRG4Q9BZD6 226 aa14.28□□□□□ -0.12
TUBB3-213ENST00000557262 TUBB1Q9H4B7 451 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms