RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RNF122Q9H9V4 155 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SDHAF3Q9NRP4 125 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 VPS29Q9UBQ0 182 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 TRPS1Q9UHF7 1281 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 MCM8Q9UJA3 840 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 FBXL2Q9UKC9 423 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 UTS2RQ9UKP6 389 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 ABCG2Q9UNQ0 655 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 SLC12A4Q9UP95 1085 aa7.81□□□□□ -1.16
VRK1-206ENST00000557222 H7C1Q1 480 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 PDYNP01213 254 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 RPS17P08708 135 aaKnown RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 FCGR2AP12318 317 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 POU2F1P14859 743 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 IL12BP29460 328 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 MPIP34949 423 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 CPOXP36551 454 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 SERPINB9P50453 376 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 RPS3AP61247 264 aaKnown RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 MRPS25P82663 173 aaKnown RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 CSTF3Q12996 717 aaKnown RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 HEPACAMQ14CZ8 416 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 GUSBP1Q15486 140 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 ZNF474Q6S9Z5 364 aaPredicted RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 LARP4Q71RC2 724 aaKnown RBP eCLIP7.8□□□□□ -1.164e-6■■□□□ 12.8
VRK1-206ENST00000557222 PRIMA1Q86XR5 153 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 RELL1Q8IUW5 271 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 OR4K17Q8NGC6 315 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 PPP1R14CQ8TAE6 165 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 RDH11Q8TC12 318 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 ZNF483Q8TF39 744 aaPredicted RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 IGFBPL1Q8WX77 278 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 ZNF845Q96IR2 970 aaPredicted RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 Q96MF0 132 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 FAM111AQ96PZ2 611 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 TSPYL1Q9H0U9 437 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 OR10A4Q9H209 315 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 VPS11Q9H270 941 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 MRPL46Q9H2W6 279 aaKnown RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 PTGES2Q9H7Z7 377 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 FANCFQ9NPI8 374 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 GIMAP4Q9NUV9 329 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 TAS2R9Q9NYW1 312 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 EHD3Q9NZN3 535 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 C6orf203Q9P0P8 240 aaPredicted RBP7.8□□□□□ -1.16
VRK1-206ENST00000557222 AP4B1Q9Y6B7 739 aa7.8□□□□□ -1.16
VRK1-206ENST00000557222 A0A087WV62 115 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 TTC36A6NLP5 189 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 FADS1O60427 444 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 COQ9O75208 318 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 KRT6AP02538 564 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 KRT6BP04259 564 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 IFI6P09912 130 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 IL11P20809 199 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 TBXA2RP21731 343 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 LOXP28300 417 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 EVI2BP34910 448 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 KRT6CP48668 564 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 ALDH9A1P49189 494 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 CLK3P49761 638 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 NR1H2P55055 460 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 CLDN15P56746 228 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 MRPS35P82673 323 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 DUSP2Q05923 314 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 IKZF1Q13422 519 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 RASA2Q15283 850 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 LTB4RQ15722 352 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 SPIN4Q56A73 249 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 BEX5Q5H9J7 111 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 OGFOD2Q6N063 350 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 LETMD1Q6P1Q0 360 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 VWA1Q6PCB0 445 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 SH2D5Q6ZV89 423 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 PLEKHM3Q6ZWE6 761 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 ZNF572Q7Z3I7 529 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 ATG4DQ86TL0 474 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 CIARTQ8N365 385 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 C1orf52Q8N6N3 182 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 METTL25Q8N6Q8 603 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 CNEP1R1Q8N9A8 125 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 LRRN4CLQ8ND94 238 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 OR2M3Q8NG83 312 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 GFM2Q969S9 779 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 PIK3IP1Q96FE7 263 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 PIGQQ9BRB3 760 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 FOLH1BQ9HBA9 442 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 SLC35C2Q9NQQ7 365 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 PLSCR4Q9NRQ2 329 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 FARSBQ9NSD9 589 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 ZNF701Q9NV72 531 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 PAQR5Q9NXK6 330 aaPredicted RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 KLHL28Q9NXS3 571 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 PPP4R1LQ9P1A2 415 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 HEY2Q9UBP5 337 aa7.79□□□□□ -1.16
VRK1-206ENST00000557222 MRTO4Q9UKD2 239 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 WBP11Q9Y2W2 641 aaKnown RBP7.79□□□□□ -1.16
VRK1-206ENST00000557222 IGLV3-32A0A0A0MS00 114 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms