RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PRKAA2P54646 552 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PRR5P85299 388 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 BTKQ06187 659 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZNF844Q08AG5 666 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZNF763Q0D2J5 394 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 C2orf80Q0P641 193 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GRAMD1BQ3KR37 738 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 TEX35Q5T0J7 233 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 CHMP1BQ7LBR1 199 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EXOC3L1Q86VI1 746 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EGLN2Q96KS0 407 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EMCNQ9ULC0 261 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PROCRQ9UNN8 238 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SVEP1Q4LDE5 3571 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 COQ9O75208 318 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ANGPTL1O95841 491 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 THBS1P07996 1170 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ATP5F1P24539 256 aaPredicted RBP12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 HMOX2P30519 316 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KCNJ5P48544 419 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 LCP2Q13094 533 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 KIAA0040Q15053 153 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 DECR1Q16698 335 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 BEX5Q5H9J7 111 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 EXOSC6Q5RKV6 272 aaKnown RBP12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SEZ6L2Q6UXD5 910 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 ZNF704Q6ZNC4 412 aaPredicted RBP12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PLEKHM3Q6ZWE6 761 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OR6K3Q8NGY3 331 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OR4C3Q8NH37 302 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 OR10D3Q8NH80 312 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MZB1Q8WU39 189 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 PIK3R3Q92569 461 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 MYNNQ9NPC7 610 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GIMAP4Q9NUV9 329 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 FBXO34Q9NWN3 711 aa12.84□□□□□ -0.35
CHMP4BP1-201ENST00000556017 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 A0A0J9YW62 118 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 G3V2L1 256 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OVOL3O00110 214 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GMFGO60234 142 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SLITRK5O94991 958 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OPN1LWP04000 364 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ENO1P06733 434 aaKnown RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 IFI6P09912 130 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SHC1P29353 583 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GSTM5P46439 218 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PKNOX1P55347 436 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 C17orf67Q0P5P2 114 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 TNK1Q13470 666 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FGFBP1Q14512 234 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF385BQ569K4 471 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MFSD12Q6NUT3 480 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF551Q7Z340 670 aaPredicted RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GALNT10Q86SR1 603 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 MMGT1Q8N4V1 131 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF611Q8N823 705 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 RAB3IL1Q8TBN0 382 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FAM110BQ8TC76 370 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GIMAP5Q96F15 307 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PLPPR2Q96GM1 343 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 FMO2Q99518 471 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 PTGES2Q9H7Z7 377 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 Q9N2J8 555 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SDHAF3Q9NRP4 125 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 SENP1Q9P0U3 644 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NTMQ9P121 344 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GRID1Q9ULK0 1009 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 VDAC3Q9Y277 283 aa12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 POLR3HQ9Y535 204 aaPredicted RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NUP214P35658 2090 aaPredicted RBP12.83□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ALG1L2C9J202 215 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 HS3ST1O14792 307 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EFNA2O43921 213 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GCM2O75603 506 aaPredicted RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NKX2-2O95096 273 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 OXSR1O95747 527 aaPredicted RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 ZNF17P17021 662 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 GABRA3P34903 492 aa12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 EIF1AXP47813 144 aaKnown RBP12.82□□□□□ -0.36
CHMP4BP1-201ENST00000556017 NR1H2P55055 460 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms