RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 MLF1P58340 268 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 TRA2BP62995 288 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SKP1P63208 163 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ADARB1P78563 741 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 DUSP8Q13202 625 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 BIKQ13323 160 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ABRAXAS2Q15018 415 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 Q5BKY6 102 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 XKR7Q5GH72 579 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 EXOSC6Q5RKV6 272 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 KANK2Q63ZY3 851 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 HIST2H2AA3Q6FI13 130 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF544Q6NX49 715 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 TRIM40Q6P9F5 258 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CCBE1Q6UXH8 406 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CYP2R1Q6VVX0 501 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CCDC103Q8IW40 242 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SRFBP1Q8NEF9 429 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 C7orf57Q8NEG2 295 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 BRIX1Q8TDN6 353 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CANT1Q8WVQ1 401 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PIK3R3Q92569 461 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 HOXB13Q92826 284 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 TM4SF18Q96CE8 201 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CTHRC1Q96CG8 243 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 REPS1Q96D71 796 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CCDC126Q96EE4 140 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 GIMAP5Q96F15 307 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 DACH2Q96NX9 599 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ACPTQ9BZG2 426 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 WDR55Q9H6Y2 383 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SEMA4BQ9NPR2 832 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 RPRD1BQ9NQG5 326 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ABCB10Q9NRK6 738 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PLSCR3Q9NRY6 295 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CCM2LQ9NUG4 571 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 LYARQ9NX58 379 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 WARS2Q9UGM6 360 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CD300AQ9UGN4 299 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 VPS4AQ9UN37 437 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 NSG1A0A0A6YYJ2 146 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 LINC00854A0A1B0GVQ3 168 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PRORSD1PA6NEY8 169 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 COL6A6A6NMZ7 2263 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 M0R3G1 203 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ADAM10O14672 748 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 BET1O15155 118 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 HDAC3O15379 428 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PDPK1O15530 556 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 FGF17O60258 216 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 NPHS1O60500 1241 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PRMT3O60678 531 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 B3GALNT1O75752 331 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 NEURL1O76050 574 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 OR4F21O95013 312 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 HSPA4LO95757 839 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 AIFM1O95831 613 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 BPNT1O95861 308 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ELK4P28324 431 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 IL12AP29459 219 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PPP2R1BP30154 601 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 DDOSTP39656 456 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 FRKP42685 505 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 HTR6P50406 440 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CDH13P55290 713 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 DUSP2Q05923 314 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SNTA1Q13424 505 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ELAVL1Q15717 326 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ESCO2Q56NI9 601 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 FHL5Q5TD97 284 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 LIPMQ5VYY2 423 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 STEAP3Q658P3 488 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 C18orf63Q68DL7 685 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SIAH3Q8IW03 269 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 UBQLNLQ8IYU4 475 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 MORN4Q8NDC4 146 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PSD4Q8NDX1 1056 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 B3GNT7Q8NFL0 401 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 OR7A2PQ8NGA2 310 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 LHFPL5Q8TAF8 219 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 STON2Q8WXE9 905 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 MUL1Q969V5 352 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 CENPNQ96H22 339 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 THOC3Q96J01 351 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ST6GAL2Q96JF0 529 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 MTERF1Q99551 399 aaKnown RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 GATA5Q9BWX5 397 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 BTBD2Q9BX70 525 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 KCNN2Q9H2S1 579 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 DSN1Q9H410 356 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ADAP2Q9NPF8 381 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF71Q9NQZ8 489 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 AGPAT4Q9NRZ5 378 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 ACOXLQ9NUZ1 547 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 TEX10Q9NXF1 929 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 MS4A12Q9NXJ0 267 aa3.62□□□□□ -1.83
LINC00648-202ENST00000555985 PAQR5Q9NXK6 330 aaPredicted RBP3.62□□□□□ -1.83
LINC00648-202ENST00000555985 SMPD3Q9NY59 655 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms