RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZSWIM7Q19AV6 140 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 KLHL26Q53HC5 615 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 FAM13CQ8NE31 585 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 OR10G3Q8NGC4 313 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 OR4C3Q8NH37 302 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 CNTNAP3BQ96NU0 1288 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 ARHGAP9Q9BRR9 750 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 CNTNAP3Q9BZ76 1288 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 MUC13Q9H3R2 512 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 RUBCNLQ9H714 662 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 GORASP2Q9H8Y8 452 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
SHMT2-221ENST00000555773 GPC6Q9Y625 555 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 CHCHD2Q9Y6H1 151 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-221ENST00000555773 CACNA1GO43497 2377 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 A0A1W2PQD3 144 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ALG1L2C9J202 215 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 H3BNH8 94 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 CXCR6O00574 342 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SCDO00767 359 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ICOSLGO75144 302 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 UGT2B17O75795 530 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 NEURL1O76050 574 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SNX4O95219 450 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ZIC2O95409 532 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 P04436 131 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SFTPCP11686 197 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 IL7RP16871 459 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 GGT1P19440 569 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 TCN1P20061 433 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 DCTP40126 519 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ADH7P40394 386 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 CASP3P42574 277 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 TRAP1Q12931 704 aaKnown RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 LARS2Q15031 903 aaKnown RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 OR1C1Q15619 314 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 GRAMD1BQ3KR37 738 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 LINC00303Q3SY05 128 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 GLYATQ6IB77 296 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SPINK14Q6IE38 97 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SLC25A25Q6KCM7 469 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SLC30A6Q6NXT4 461 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 GALNT10Q86SR1 603 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 CMIPQ8IY22 773 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ULK2Q8IYT8 1036 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 BHLHE22Q8NFJ8 381 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 OR52E4Q8NGH9 312 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 OR5M3Q8NGP4 307 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 RNF138Q8WVD3 245 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 RASSF5Q8WWW0 418 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 POP5Q969H6 163 aaKnown RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ZG16BQ96DA0 208 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ASB9Q96DX5 294 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ABHD17AQ96GS6 310 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 NODALQ96S42 347 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SDHAF3Q9NRP4 125 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SACM1LQ9NTJ5 587 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ANKRD10Q9NXR5 420 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ACTR3BQ9P1U1 418 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 PACSIN3Q9UKS6 424 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 CNOT11Q9UKZ1 510 aaKnown RBP11.44□□□□□ -0.58
SHMT2-221ENST00000555773 USP22Q9UPT9 525 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 DTNAQ9Y4J8 743 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 PCDHGB6Q9Y5F9 930 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 SNX13Q9Y5W8 968 aa11.44□□□□□ -0.58
SHMT2-221ENST00000555773 ZFHX4Q86UP3 3567 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 TRAV17A0A0B4J275 112 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 PRAMEF25A6NGN4 478 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 GCM2O75603 506 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-221ENST00000555773 SLC25A12O75746 678 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 MFN2O95140 757 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 STAMBPO95630 424 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 OXSR1O95747 527 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-221ENST00000555773 THBS1P07996 1170 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 SP1P08047 785 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 CD46P15529 392 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 CNR1P21554 472 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 RPS4Y1P22090 263 aaKnown RBP11.43□□□□□ -0.58
SHMT2-221ENST00000555773 EVI2BP34910 448 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 TNFSF10P50591 281 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 KCNJ10P78508 379 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 KCNAB2Q13303 367 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 RPS26P11Q5JNZ5 115 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-221ENST00000555773 OLIG3Q7RTU3 272 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 MDGA2Q7Z553 956 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 ZNF227Q86WZ6 799 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 MISPQ8IVT2 679 aa11.43□□□□□ -0.58
SHMT2-221ENST00000555773 EID3Q8N140 333 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms