RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GSX2Q9BZM3 304 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 TUBB1Q9H4B7 451 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 PPCSQ9HAB8 311 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 LRTM1Q9HBL6 345 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 Q9N2J8 555 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 C1orf109Q9NX04 203 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 FAM120CQ9NX05 1096 aaKnown RBP9.75□□□□□ -0.85
TDP1-212ENST00000555565 GALNT8Q9NY28 637 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 MED11Q9P086 117 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 C6orf203Q9P0P8 240 aaPredicted RBP9.75□□□□□ -0.85
TDP1-212ENST00000555565 ABCG2Q9UNQ0 655 aa9.75□□□□□ -0.85
TDP1-212ENST00000555565 PRR14LQ5THK1 2151 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 A0A1W2PNV4 684 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 GXYLT2A0PJZ3 443 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 A8MXE2 369 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 H0YC42 278 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 SLC28A1O00337 649 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 AZIN1O14977 448 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 IL33O95760 270 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 IGKV1D-16P01601 117 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 IFI6P09912 130 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 PEPDP12955 493 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 PAX1P15863 534 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 SDC1P18827 310 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 HK1P19367 917 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 LOXP28300 417 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 GABRA3P34903 492 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 MAP3K8P41279 467 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 RFX3P48380 749 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 TPD52P55327 224 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 HSPB3Q12988 150 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 STX5Q13190 355 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 PCLAFQ15004 111 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 ZNHIT3Q15649 155 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 ZNF385BQ569K4 471 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 PODNL1Q6PEZ8 512 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 APOOLQ6UXV4 268 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 MARCH3Q86UD3 253 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 UBQLNLQ8IYU4 475 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 DUSP19Q8WTR2 217 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 TMEM158Q8WZ71 300 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 CIDECQ96AQ7 238 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 ZNF764Q96H86 408 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 MARK4Q96L34 752 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 CCT7Q99832 543 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 GATA5Q9BWX5 397 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 PIGMQ9H3S5 423 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 EQTNQ9NQ60 294 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 SDHAF3Q9NRP4 125 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 PACSIN3Q9UKS6 424 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 ZNF337Q9Y3M9 751 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
TDP1-212ENST00000555565 RAI1Q7Z5J4 1906 aaPredicted RBP9.74□□□□□ -0.85
TDP1-212ENST00000555565 OR2M5A3KFT3 312 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 SLC22A20A6NK97 555 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 PDPK1O15530 556 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 CTIFO43310 598 aaKnown RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 RGS14O43566 566 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 AKAP10O43572 662 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 TBX19O60806 448 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 UTS2O95399 124 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 CRHP06850 196 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 LINC00032P0C843 101 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 NID1P14543 1247 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 CPA2P48052 419 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 PTH2RP49190 550 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 SUCLG1P53597 346 aaKnown RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 PSMD4P55036 377 aaKnown RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 PDE7AQ13946 482 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 GANABQ14697 944 aaKnown RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 RFTN2Q52LD8 501 aaPredicted RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 RAET1LQ5VY80 246 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 HEPHL1Q6MZM0 1159 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 RNF165Q6ZSG1 346 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 EXOC3L1Q86VI1 746 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 OR5M1Q8NGP8 315 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 FIG4Q92562 907 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 PIK3R3Q92569 461 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 HOXB13Q92826 284 aaPredicted RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 STARD4Q96DR4 205 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 C1GALT1C1Q96EU7 318 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 WFIKKN1Q96NZ8 548 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 CCL19Q99731 98 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 TRMOQ9BU70 441 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 REEP4Q9H6H4 257 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 L2HGDHQ9H9P8 463 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 BAIAP2L1Q9UHR4 511 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 MRTO4Q9UKD2 239 aaKnown RBP9.73□□□□□ -0.85
TDP1-212ENST00000555565 FIS1Q9Y3D6 152 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 DNAJC15Q9Y5T4 150 aa9.73□□□□□ -0.85
TDP1-212ENST00000555565 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 IGLV3-32A0A0A0MS00 114 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TTC36A6NLP5 189 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TMEM233B4DJY2 109 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 MSTNO14793 375 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 LSM1O15116 133 aaKnown RBP9.72□□□□□ -0.85
TDP1-212ENST00000555565 TRIM13O60858 407 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 TNFRSF21O75509 655 aa9.72□□□□□ -0.85
TDP1-212ENST00000555565 NKX2-2O95096 273 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms