RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 MRGPREQ86SM8 312 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 LSRQ86X29 649 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 OR5M3Q8NGP4 307 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 OR8K3Q8NH51 312 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 NUBPLQ8TB37 319 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 M1APQ8TC57 530 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 APOBEC4Q8WW27 367 aaKnown RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 PROX1Q92786 737 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 OMA1Q96E52 524 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ZNF354BQ96LW1 612 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 AGPAT4Q9NRZ5 378 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 NDUFAF4Q9P032 175 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 MYOTQ9UBF9 498 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 BAG5Q9UL15 447 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 ZNF443Q9Y2A4 671 aaPredicted RBP9.41□□□□□ -0.9
SRP54-208ENST00000555557 PCDHGA6Q9Y5G7 932 aa9.41□□□□□ -0.9
SRP54-208ENST00000555557 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 PCSK5Q92824 1860 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 A0A1W2PQ72 361 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 PCDH17O14917 1159 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 TO15178 435 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 CLOCKO15516 846 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 ABCB7O75027 752 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 OR2J2O76002 312 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 IL33O95760 270 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 LGI1O95970 557 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 ITGAMP11215 1152 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 FUT4P22083 530 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 RPS4Y1P22090 263 aaKnown RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 GCKP35557 465 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 MAGEA2P43356 314 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 PTDSS1P48651 473 aaKnown RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 IST1P53990 364 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 HOXC5Q00444 222 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 LARS2Q15031 903 aaKnown RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 TRIP10Q15642 601 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 IRAK1BP1Q5VVH5 260 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 ZNF836Q6ZNA1 936 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 CARM1Q86X55 608 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 ICA1LQ8NDH6 482 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 C17orf47Q8NEP4 570 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 OR5L2Q8NGL0 311 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 OR6T1Q8NGN1 323 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 ADAMTS17Q8TE56 1095 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 RASSF5Q8WWW0 418 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 GEMIN6Q8WXD5 167 aaKnown RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 DIO2Q92813 273 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 TP53INP1Q96A56 240 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 KIAA1143Q96AT1 154 aaPredicted RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 HSPBAP1Q96EW2 488 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 PINK1Q9BXM7 581 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 MMP25Q9NPA2 562 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 POLE3Q9NRF9 147 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 C6orf203Q9P0P8 240 aaPredicted RBP9.4□□□□□ -0.9
SRP54-208ENST00000555557 ZNF232Q9UNY5 417 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 IFT52Q9Y366 437 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 NPFFR2Q9Y5X5 522 aa9.4□□□□□ -0.9
SRP54-208ENST00000555557 NPIPB9F8W1W9 429 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 ACOX3O15254 700 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 TSPAN2O60636 221 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 ICOSLGO75144 302 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 UGT2B11O75310 529 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 SEMA7AO75326 666 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 UTS2O95399 124 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NADKO95544 446 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 HPP00738 406 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 LDLRP01130 860 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 CYP4B1P13584 511 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 WT1P19544 449 aaPredicted RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 PEX2P28328 305 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 IL12BP29460 328 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 PRKAR1BP31321 381 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 ATP12AP54707 1039 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NRG3P56975 720 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 EEF1A1P68104 462 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 ATP6AP1Q15904 470 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 GRAMD1BQ3KR37 738 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 MRPL2Q5T653 305 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 APOOLQ6UXV4 268 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 SLC34A3Q8N130 599 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 GATSQ8NAP1 163 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 POP5Q969H6 163 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 NACC2Q96BF6 587 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 VPS50Q96JG6 964 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NTN4Q9HB63 628 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 CACYBPQ9HB71 228 aaKnown RBP9.39□□□□□ -0.91
SRP54-208ENST00000555557 CTPS2Q9NRF8 586 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 VNN3Q9NY84 501 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 RHCGQ9UBD6 479 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 U3KQV3 271 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 SAC3D1A6NKF1 404 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 GNGT2O14610 69 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 NKX2-8O15522 239 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 TPST2O60704 377 aa9.39□□□□□ -0.91
SRP54-208ENST00000555557 ITGA10O75578 1167 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms