RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PRIM2P49643 509 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 GFRA1P56159 465 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 FAM174BQ3ZCQ3 159 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 SPDYE7PQ495Y7 208 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 ACSF3Q4G176 576 aaPredicted RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 TMEM211Q6ICI0 200 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 CDC73Q6P1J9 531 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 B3GNT6Q6ZMB0 384 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 OLIG3Q7RTU3 272 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 TRIM42Q8IWZ5 723 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 LRRC34Q8IZ02 419 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 KIRREL3Q8IZU9 778 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 COX18Q8N8Q8 333 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 OR56A1Q8NGH5 318 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 OR5D16Q8NGK9 328 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 OR14L1PQ8NHC6 308 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 SFXN5Q8TD22 340 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 ABTB1Q969K4 478 aaPredicted RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 ACTRT3Q9BYD9 372 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 PRDM14Q9GZV8 571 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 PIGUQ9H490 435 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 PPP4R1LQ9P1A2 415 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 Q9UFV3 132 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 ABCG2Q9UNQ0 655 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 CAMK2AQ9UQM7 478 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 RPH3AQ9Y2J0 694 aaPredicted RBP12.41□□□□□ -0.42
SNX6-203ENST00000555416 FBN2P35556 2912 aa12.41□□□□□ -0.42
SNX6-203ENST00000555416 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 TRPC5OSA6NMA1 111 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 FAM90A27PA6NNH2 459 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 E9PBE3 544 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 CPSF4O95639 269 aaKnown RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 SNRPB2P08579 225 aaKnown RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 ZFP36L2P47974 494 aaKnown RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 POU6F2P78424 691 aaPredicted RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 CD226Q15762 336 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNX6-203ENST00000555416 NXNQ6DKJ4 435 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 ZCCHC12Q6PEW1 402 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 C6orf120Q7Z4R8 191 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 SPATA19Q7Z5L4 167 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 EID3Q8N140 333 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 NATD1Q8N6N6 113 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 NAXEQ8NCW5 288 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 OR4K17Q8NGC6 315 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 OR4A15Q8NGL6 344 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 OR5M1Q8NGP8 315 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 CHMP6Q96FZ7 201 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 STACQ99469 402 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 NPAS1Q99742 590 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 INPP5KQ9BT40 448 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 G6PC3Q9BUM1 346 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 BTBD2Q9BX70 525 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 VIPAS39Q9H9C1 493 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 NEUROD4Q9HD90 331 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 DUSP22Q9NRW4 184 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 GIN1Q9NXP7 522 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
SNX6-203ENST00000555416 USH1CQ9Y6N9 552 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 NOTCH2Q04721 2471 aa12.4□□□□□ -0.42
SNX6-203ENST00000555416 ARHGAP21Q5T5U3 1957 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 RNF103-CHMP3A0A140T963 221 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 PRSS51A0A1B0GVH4 220 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ALG1L2C9J202 215 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 OIP5O43482 229 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ANGPTL1O95841 491 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 TBXA2RP21731 343 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 CHRNB4P30926 498 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 S100A3P33764 101 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 CDKN2CP42773 168 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 LHX2P50458 406 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 PSMD4P55036 377 aaKnown RBP12.39□□□□□ -0.43
SNX6-203ENST00000555416 SRYQ05066 204 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 TFF3Q07654 80 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 DCST2Q5T1A1 773 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ARSKQ6UWY0 536 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ACAD11Q709F0 780 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 IFNEQ86WN2 208 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 OR10Q1Q8NGQ4 319 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 LILRB4Q8NHJ6 448 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ACTRT2Q8TDY3 377 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 CA5BP1Q8WTZ4 195 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 C7orf26Q96N11 449 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 TUBA1CQ9BQE3 449 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
SNX6-203ENST00000555416 SLC6A13Q9NSD5 602 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
SNX6-203ENST00000555416 COQ3Q9NZJ6 369 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
SNX6-203ENST00000555416 PCDHGB3Q9Y5G1 929 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 DCHS2Q6V1P9 2916 aa12.39□□□□□ -0.43
SNX6-203ENST00000555416 IGLV3-32A0A0A0MS00 114 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms