RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 FAM120BQ96EK7 910 aaKnown RBP10.72□□□□□ -0.69
VRK1-204ENST00000555351 C1GALT1C1Q96EU7 318 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 C3orf30Q96M34 536 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 TBL1XR1Q9BZK7 514 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 BHLHE41Q9C0J9 482 aaPredicted RBP10.72□□□□□ -0.69
VRK1-204ENST00000555351 PIGMQ9H3S5 423 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 DSN1Q9H410 356 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 PIGUQ9H490 435 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 UBQLN4Q9NRR5 601 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 SIRT3Q9NTG7 399 aaPredicted RBP10.72□□□□□ -0.69
VRK1-204ENST00000555351 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 EIF3LQ9Y262 564 aaKnown RBP10.72□□□□□ -0.69
VRK1-204ENST00000555351 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 TACC2O95359 2948 aa10.72□□□□□ -0.69
VRK1-204ENST00000555351 A0A1W2PQD3 144 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 FAM221AA4D161 298 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 C7orf72A4D263 438 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 CLCA1A8K7I4 914 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ESPNB1AK53 854 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 KDM4EB2RXH2 506 aaPredicted RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 SCO2O43819 266 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 TNFRSF21O75509 655 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 KCNK2O95069 426 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ANGPTL1O95841 491 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 IGKV1D-16P01601 117 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 MYZAPP0CAP1 466 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ACP2P11117 423 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ZNF17P17021 662 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 HK1P19367 917 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 KIR2DL3P43628 341 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 DGKQP52824 942 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ABCE1P61221 599 aaKnown RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 PTGR1Q14914 329 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 DAZAP2Q15038 168 aaPredicted RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 TMEM44Q2T9K0 475 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 FLYWCH1Q4VC44 716 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 IL23RQ5VWK5 629 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 OR5M10Q6IEU7 315 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 BHLHB9Q6PI77 547 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 CDH24Q86UP0 819 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 INTS1Q8N201 2190 aaKnown RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 C9orf106Q8NAJ2 232 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 SLC16A11Q8NCK7 471 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 OR56A1Q8NGH5 318 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 AGR3Q8TD06 166 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 PIK3R3Q92569 461 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 SLC9A6Q92581 669 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 TUBGCP3Q96CW5 907 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 RMND5BQ96G75 393 aaPredicted RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 BTBD2Q9BX70 525 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 EQTNQ9NQ60 294 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 ZCCHC3Q9NUD5 404 aaKnown RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 NOP53Q9NZM5 478 aaKnown RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.71□□□□□ -0.69
VRK1-204ENST00000555351 ZNF175Q9Y473 711 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 AP4B1Q9Y6B7 739 aa10.71□□□□□ -0.69
VRK1-204ENST00000555351 V9GYY5 206 aaPredicted RBP10.71□□□□□ -0.69
VRK1-204ENST00000555351 GXYLT2A0PJZ3 443 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 SKAP2O75563 359 aaPredicted RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 CTAG2O75638 210 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 OXSR1O95747 527 aaPredicted RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 HMGN2P05204 90 aaKnown RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 LAMP1P11279 417 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 POU3F2P20265 443 aaPredicted RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 UQCRC1P31930 480 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 RPL14P50914 215 aaKnown RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 SLC18A1P54219 525 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 PRKAG1P54619 331 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 CLDN8P56748 225 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 FGFBP1Q14512 234 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 CHI3L2Q15782 390 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 DUSP5Q16690 384 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 GRAMD1BQ3KR37 738 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 CDC73Q6P1J9 531 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 CHMP1BQ7LBR1 199 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
VRK1-204ENST00000555351 MARCH3Q86UD3 253 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 COX18Q8N8Q8 333 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 OR7A2PQ8NGA2 310 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 OR4C3Q8NH37 302 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 ACTRT3Q9BYD9 372 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 RTN4RQ9BZR6 473 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 HOXD1Q9GZZ0 328 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 FLRT3Q9NZU0 649 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 MED11Q9P086 117 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 EDARQ9UNE0 448 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
VRK1-204ENST00000555351 OR2M5A3KFT3 312 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 MSTNO14793 375 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 NDUFB5O43674 189 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 HPGDP15428 266 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 CCT3P49368 545 aaKnown RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 STARP49675 285 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 WNT3P56703 355 aa10.69□□□□□ -0.7
VRK1-204ENST00000555351 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 POU6F2P78424 691 aaPredicted RBP10.69□□□□□ -0.7
VRK1-204ENST00000555351 SRYQ05066 204 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms