RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ZNF321PQ8N8H1 164 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 TUBA1CQ9BQE3 449 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 GAREM1Q9H706 876 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 ZNF223Q9UK11 482 aaPredicted RBP8.25□□□□□ -1.09
TDP1-210ENST00000554976 SLC9A8Q9Y2E8 581 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 MAU2Q9Y6X3 613 aa8.25□□□□□ -1.09
TDP1-210ENST00000554976 A0A087WUU8 490 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 A0A1B0GX78 115 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 FMO6PO60774 539 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SEC14L2O76054 403 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SOX30O94993 753 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DBIP07108 87 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 ADRA2AP08913 450 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SP9P0CG40 484 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OSMP13725 252 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 GSSP48637 474 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 POU6F2P78424 691 aaPredicted RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 SERTAD2Q14140 314 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SMN1Q16637 294 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 DCST1Q5T197 706 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 TTLL10Q6ZVT0 673 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 GDF7Q7Z4P5 450 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 TMEM151BQ8IW70 566 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 NLGN4XQ8N0W4 816 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR7G1Q8NGA0 311 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR13F1Q8NGS4 319 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR2I1PQ8NGU4 316 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 C16orf52Q8NHV5 167 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 PIGKQ92643 395 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DGAT2Q96PD7 388 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 PELOQ9BRX2 385 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR10A5Q9H207 317 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 LRRN3Q9H3W5 708 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 EVA1AQ9H8M9 152 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DHCR7Q9UBM7 475 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 RABL2BQ9UNT1 228 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MRPS33Q9Y291 106 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 FAM32AQ9Y421 112 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 SPEGQ15772 3267 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 H3BSA7 217 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MRPS14O60783 128 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 PRAMEF2O60811 474 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR5F1O95221 314 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 IGFBP1P08833 259 aaPredicted RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 S100A1P23297 94 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DCKP27707 260 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 GABRA3P34903 492 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SLC15A1P46059 708 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 OR1D4P47884 311 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 CRISP1P54107 249 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 RP1P56715 2156 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SMIM11AP58511 58 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 RAB39AQ14964 217 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DECR1Q16698 335 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.24□□□□□ -1.09
TDP1-210ENST00000554976 TMEM201Q5SNT2 666 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SLX4IPQ5VYV7 408 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 RHBDD2Q6NTF9 364 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 WDR88Q6ZMY6 472 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 KCTD8Q6ZWB6 473 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ZNF441Q8N8Z8 693 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SCAIQ8N9R8 606 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 SLC38A9Q8NBW4 561 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 FAM71CQ8NEG0 241 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MUL1Q969V5 352 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ADIPOR1Q96A54 375 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DGCR14Q96DF8 476 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 ITPKCQ96DU7 683 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 CLIP3Q96DZ5 547 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MPP4Q96JB8 637 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 APOL4Q9BPW4 351 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 CLCA2Q9UQC9 943 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 N6AMT1Q9Y5N5 214 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 NPIPA5A0A0B4J1W7 369 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 NPIPA7E9PJI5 369 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ARHGAP33O14559 1287 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ADAM10O14672 748 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 RPLP0P05388 317 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 NPIPA8P0DM63 369 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 PRG2P13727 222 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 FMO3P31513 532 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MASP1P48740 699 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 GPR143P51810 404 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 CDK5Q00535 292 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ZNF155Q12901 538 aaPredicted RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 DCTN2Q13561 401 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 FGFBP1Q14512 234 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 ZBED5Q49AG3 693 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 MRPL2Q5T653 305 aaKnown RBP8.24□□□□□ -1.09
TDP1-210ENST00000554976 LINC00114Q6XXX2 140 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 PRICKLE2Q7Z3G6 844 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 LINC00471Q8N535 108 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 COX18Q8N8Q8 333 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 RCBTB1Q8NDN9 531 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 FNDC8Q8TC99 324 aa8.24□□□□□ -1.09
TDP1-210ENST00000554976 TSLPQ969D9 159 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms